CX291648

Overview
NameCX291648
Unique NameCX291648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+G +R+AT G+A     F     +  +PL P     ++V+ IR+RKGLK+ +    +F
Sbjct:  569 KAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQTPQEQMGGATKEIQGRRGIIIDMTSEGDTTIIESKA--PVSELFGFAGDIRSATEGRAMWSTEF-----VGFEPL-PTNMITEVVSGIRERKGLKKDLPQAQDF 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 62/160 (38.75%), Postives = 89/160 (55.62%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLK 484
            A + G LA E  +G+  ++ D VLH DAIHRG  Q+IP AR  I  + + A P LLEP+  V I  P+  +G     ++ +RG +  +M++ G  +  IKA  PV E FGF+G +R AT G+      F  ++ +  D  E      QL+  IR+RKGLK
Sbjct:  573 AMRNGPLAAEKCQGVKVKLMDAVLHEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQIL-DMEQEG-DMAIIKAKCPVAEMFGFAGAIRGATQGRCLWSIEFAGYEKVPRDMQE------QLIKQIRERKGLK 724          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            + G L  E +  +   + D  LH DAIHRG  Q+IP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+G +R+AT G+A     F  +D++ S  L        +V  IR+RKGLK+++   S+F
Sbjct:  569 RAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPAARQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVVPSSILN------DIVGQIRERKGLKKELPKASDF 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21
Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+G +R+AT G+A     F  ++ +      P +   ++V  IRKRKGLK  +    +F
Sbjct:  569 KAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQVPQEQMGGATKEIQGRRGVIIDMTSEGDTTVIESKA--PVSELFGFAGDIRSATEGRAMWSTEFAGFEPL------PMSLMTEVVTGIRKRKGLKAALPQAEDF 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            + G L  E +  +   + D  LH DAIHRG  Q+IP +R+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG V   M   G  L  I+A +PV E FGF+G +R+AT G+A     F  +D++      P +   ++V  IR+RKGLK+ +   S++
Sbjct:  569 RAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPASRQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-VILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVV------PSSILTEIVGQIRERKGLKKDLPKASDY 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21
Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 493
            A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  + I  P   +G   S +  +RG V +      T    +   +PV E FGFSG +R+AT G+A     F  ++++      P +    +V  IRKRKGLKEQM
Sbjct:  568 ALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLDITSEGDT--ITVVGRVPVAELFGFSGDIRSATEGRAMWNTEFAGFEIV------PNSLVKDVVIAIRKRKGLKEQM 722          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 61/172 (35.47%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLK-EQMTPLSEFED 517
            A +EG LA+E  RG+   + D  +H D +HRG  QVIP  +R IY   L A   LLEP+  + +  P+  +G +   +  +RG + EE+Q+ G  +  IK   PV E FGF+  +R+AT G+A        ++ +      P     Q++ +IR+RKGLK E   P    ED
Sbjct: 1091 AMEEGPLAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIKRAIYGGMLLADTHLLEPMQYIYVTVPQDYMGAVTKEIQGRRGTI-EEIQQEGDTVI-IKGKAPVAEMFGFANDIRSATEGRAIWTTEHAGYERV------PEELEEQIIREIRERKGLKPEPPKPEDYIED 1254          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            + G L  E +  +   + D  LH DAIHRG  QVIP +R+ I A  L A   LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+G +R+AT G+A     F  +D++      P +    +V  IR+RKGLK+++   S+F
Sbjct:  569 RAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQVIPASRQAIQAGMLMADDTLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMSTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQNDIVGQIRERKGLKKELPKASDF 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 2
Query:   11 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 511
            + G L  E +  +   + D  LH DAIHRG  QVIP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+G +R+AT G+A     F  +D++      P +   ++V  IR+RKGLK  +   S++
Sbjct:  569 RAGPLTREPVANMKCVLVDAKLHEDAIHRGPAQVIPAARQAIQAGMLMAEDCLLEPYQKVFVQVPQLTMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQTEVVGQIRERKGLKRDLPKASDY 727          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            A  +G L  E MRG+ FE+ D VLHADAIHRG  Q++   + +     L A P L EP+Y VEI  P    G + ++L  KRG   +    PG     I   LPV ESF F+  L++ + G+A     F H+ ++  +  +P +   + V  +RK K +         F D+L
Sbjct:  678 AVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLLQPVKNLCKGLLLAAGPILYEPIYEVEITTPNDYSGAVTTILLSKRGTAEDFKTLPGNDTTMITGTLPVKESFTFNEDLKSGSRGKAGASMRFSHYSILPGNLEDPNSLMFKTVEAVRKLKKMNPAPPTPDSFFDRL 850          
The following BLAST results are available for this feature:
BLAST of CX291648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_METMT1.086e-2136.53Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_METJA1.086e-2138.75Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METAC1.418e-2138.32Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_METBU4.125e-2135.93Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METMA5.388e-2137.13Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METPE7.036e-2138.04Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_METKA9.190e-2135.47Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_METBF9.190e-2137.72Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_METTE1.568e-2037.72Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_ENCCU1.568e-2034.68Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]

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Properties
Property NameValue
Genbank descriptionC03011F09SK OF2 Citrus clementina cDNA clone C03011F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291648 ID=CX291648; Name=CX291648; organism=Citrus clementina; type=EST; length=714bp
GTGGGCATCGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCT
GCTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGT
GGTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCT
CACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGG
CTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAGAAACGT
GGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACAT
CAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCACTTTGA
GGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGATCACTGG
GACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGCTGCACAGCT
TGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAATGACACCAC
TATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGACATCAAGGGT
GAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCAAATGACACC
GCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGACATCAAGGG
TGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTGTTTCAAGTT
TTTCAATATCCTCA
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