CX291650

Overview
NameCX291650
Unique NameCX291650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 79/145 (54.48%), Postives = 104/145 (71.72%), Query Frame = -3
Query:  306 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 707
            M    W++V+ +NLTG FL TQ           GRI+NI+SVVG  GN+GQ NYS  KAG+IG TK++AKE A RN+ VNA+APGFI +DMTA L E++++K  E+IPLGR+G PEEVA +V FL  +  A YITG+V+ ++GGM
Sbjct:  104 MSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC-SELASYITGEVIHVNGGM 247          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN+ S+VG +GN GQANY A KAGVIGLTKT A+E ASR I VNA+APGFI SDMT  L +DL+ ++LE+IPL R+G+  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:   99 MKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 244          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN+ S+VG +GN GQANY A KAGVIGLTKT A+E ASR I VNA+APGFI SDMT  L +DL+ ++LE+IPL R+G+  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:   99 MKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 244          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVID NL GVF C Q           G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGFI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM M
Sbjct:  101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36
Identity = 80/147 (54.42%), Postives = 104/147 (70.75%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+  W  VI++NL GVF  TQ           G I+N++SVVG+ GN GQ NY+A+KAGVIG+TKT AKE A RNI VNA+APGFI + MT KL E   +  L +IPLGR+G+PEEVA ++ FLA +  + Y+TGQV+ IDGG+V+
Sbjct:  101 MKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKLPEKARETALSRIPLGRFGKPEEVAQVILFLA-SDESSYVTGQVIGIDGGLVI 246          
The following BLAST results are available for this feature:
BLAST of CX291650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FABG_AQUAE2.398e-3754.483-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
FABG_STAES4.090e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ4.090e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAW6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC6.976e-3755.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_THEMA3.462e-3654.423-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionC03011F11SK OF2 Citrus clementina cDNA clone C03011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291650 ID=CX291650; Name=CX291650; organism=Citrus clementina; type=EST; length=709bp
TTTTTTTTTTTGAAAGCAATTTGAAGACAACATATAGCAGAGTATGTATC
ACCCAAAAACTACATTCCATAATGCCAATTTGAAGTACAACAAATGTTAC
GCGCCTCATGTTTGGTTTTTGCAACATGCTTAGCTTAAATTCTACCAAAA
CTTACCTGAATTTTTATTTCATAACAACACTTTGGCAACATTTCCTCATA
GGATCATAAAGCAGACAAAGTTTCAACCCAGTCGATCTTACATATGAGAG
CTACAGGTCAGAACTGAAACTAAACCAGGCAGAATGGGTCACTGACCTAC
ATAACCATTCCTCCGTCAATAGTAAGCACCTGTCCAGTAATGTAACCGGC
AGCGGGATTGAGGGCCAAGAATTCCACCAGTCCAGCAACTTCTTCAGGTT
GGCCATACCTTCCTAAGGGGATTTTCTCCAAGATCTTCTTTTCTAGGTCT
TCGCCAAGCTTGGCGGTCATATCAGACGCGATGAATCCTGGTGCAATAGC
ATTGACATTAATGTTTCTGCTTGCATATTCCTTTGCAACAGTTTTTGTCA
GGCCAATAACACCTGCTTTTGCAGCACTGTAATTGGCTTGGCCAATATTT
CCAACCAGACCAACAACTGATGCTATATTGATTATTCTTCCCTGTGTACA
CAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCATTGTGACT
TCTTCATTC
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