CX291650

Overview
NameCX291650
Unique NameCX291650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.999e-35
Identity = 74/147 (50.34%), Postives = 99/147 (67.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCT-----------QGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W D+++ NLT +F  +           QGRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + VN +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L ++GGM M
Sbjct:   98 MKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETLHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 79/147 (53.74%), Postives = 102/147 (69.39%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   +  VID+NL   F+  +           GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VNA+APGFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA N A+ YITGQ L ++GGM+M
Sbjct:   95 MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNHAS-YITGQTLHVNGGMLM 240          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 79/147 (53.74%), Postives = 102/147 (69.39%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   +  VID+NL   F+  +           GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VNA+APGFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA N A+ YITGQ L ++GGM+M
Sbjct:   95 MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS-YITGQTLHVNGGMLM 240          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34
Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D+I+ NLT ++  ++           GRIIN+ SVVG +GN GQ NY+AAKAGVIG TK++A+E ASR + VN +APGFI +DMT  L +D     L  +P GR G P E+A  V FLA +P A YITG+ L ++GGM M
Sbjct:   98 MKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDDQRAATLSNVPAGRLGDPREIASAVVFLA-SPEAAYITGETLHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34
Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   +  VID+NL   F+  +           GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VNA+APGFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA +  A YITGQ + ++GGM+M
Sbjct:   95 MKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGMPEDVANAVAFLA-SDQASYITGQTIHVNGGMLM 240          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33
Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   +  VID+NL   F+  +           GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VN +APGFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA +  A YITGQ + ++GGM+M
Sbjct:   95 MKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGMPEDVAHAVAFLA-SDQASYITGQTIHVNGGMLM 240          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33
Identity = 75/147 (51.02%), Postives = 99/147 (67.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   +  VID+NL   F+  +           GRIINI S+VG+ GN GQANY A+KAG+IG+TK++A E A+R I VNA+APGFI SDMT KL ++ ++ I  KIP G YG PE++A  V FLA +  + YITGQ L ++GGM+M
Sbjct:   95 MKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDKLNDEQKEAITRKIPKGTYGMPEDIANAVAFLA-SKQSSYITGQTLHVNGGMLM 240          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D+I+ NL+ VF  ++           GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA + AA YITG+ L ++GGM M
Sbjct:   98 MKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-YITGETLHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D+I+ NL+ VF  ++           GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA +  A YITG+ L ++GGM M
Sbjct:   98 MKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASAVAFLA-SDEASYITGETLHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D+I+ NL+ VF  ++           GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA +  A YITG+ L ++GGM M
Sbjct:   98 MKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASAVAFLA-SDEASYITGETLHVNGGMYM 243          
The following BLAST results are available for this feature:
BLAST of CX291650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FABG_VIBCH4.999e-3550.343-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_RICTY4.232e-3453.743-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICPR4.232e-3453.743-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_VIBHA7.219e-3449.663-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_RICFE7.219e-3452.383-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICCN3.583e-3351.703-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICBR6.111e-3351.023-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_SHIFL3.961e-3250.343-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_SALTY3.961e-3249.663-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI3.961e-3249.663-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]

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Properties
Property NameValue
Genbank descriptionC03011F11SK OF2 Citrus clementina cDNA clone C03011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291650 ID=CX291650; Name=CX291650; organism=Citrus clementina; type=EST; length=709bp
TTTTTTTTTTTGAAAGCAATTTGAAGACAACATATAGCAGAGTATGTATC
ACCCAAAAACTACATTCCATAATGCCAATTTGAAGTACAACAAATGTTAC
GCGCCTCATGTTTGGTTTTTGCAACATGCTTAGCTTAAATTCTACCAAAA
CTTACCTGAATTTTTATTTCATAACAACACTTTGGCAACATTTCCTCATA
GGATCATAAAGCAGACAAAGTTTCAACCCAGTCGATCTTACATATGAGAG
CTACAGGTCAGAACTGAAACTAAACCAGGCAGAATGGGTCACTGACCTAC
ATAACCATTCCTCCGTCAATAGTAAGCACCTGTCCAGTAATGTAACCGGC
AGCGGGATTGAGGGCCAAGAATTCCACCAGTCCAGCAACTTCTTCAGGTT
GGCCATACCTTCCTAAGGGGATTTTCTCCAAGATCTTCTTTTCTAGGTCT
TCGCCAAGCTTGGCGGTCATATCAGACGCGATGAATCCTGGTGCAATAGC
ATTGACATTAATGTTTCTGCTTGCATATTCCTTTGCAACAGTTTTTGTCA
GGCCAATAACACCTGCTTTTGCAGCACTGTAATTGGCTTGGCCAATATTT
CCAACCAGACCAACAACTGATGCTATATTGATTATTCTTCCCTGTGTACA
CAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCATTGTGACT
TCTTCATTC
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