CX291650

Overview
NameCX291650
Unique NameCX291650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D+I+ NL+ VF  ++           GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA + AA YITG+ L ++GGM M
Sbjct:   98 MKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-YITGETLHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 72/145 (49.66%), Postives = 100/145 (68.97%), Query Frame = -3
Query:  306 MKKSQWQDVIDLNLTGVF-LCT----------QGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 707
            M + +W  VID NL  ++ +C+           G I+NI+S+VGL G+ GQ NY+AAKAG+IG +K ++KE  S+NI VN IAPGFI +DMT  L ++L+ + L+ +PLGR G PEE+A    FLA N ++ YITGQVL++DGGM
Sbjct:  104 MSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDNLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSS-YITGQVLSVDGGM 247          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = -3
Query:  306 MKKSQWQDVIDLNLTGVF-LCT----------QGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 707
            M + +W  VI+ NL  ++ +C+           G IINI+S+VGL G+ GQ NY+AAKAG+IG +K ++KE  S+NI VN IAPGFI +DMT  L ++L+ + L+ +PLGR G PEE+A    FLA +  + YITGQVL++DGGM
Sbjct:  104 MSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKSLNDNLKNEWLKGVPLGRVGMPEEIAKAALFLA-SDGSSYITGQVLSVDGGM 247          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = -3
Query:  306 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 707
            M K+QW  VI  NL+ +F  TQ           GRIINI+SV G+ G  GQ NYSAAKAGVIG TK +A E A++ + VNAIAPG+I +DM   + ED+ + I + +P+ R G+P+E+ G V +LA +  AGY+TG  L I+GG+
Sbjct:  100 MDKAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMVMAIREDIRQAITDSVPMKRLGRPDEIGGAVSYLA-SEIAGYVTGSTLNINGGL 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.274e-30
Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W DV++ NL  ++  ++           GRIINI SVVG +GN GQ NY+AAKAG+ G T+ +A+E  SR I VNA+APGFI +DMT +L E   + +L +IPLGR GQ EE+A +V FLA + AA Y+TG  + ++GGM M
Sbjct:  101 MKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAA-YVTGATVPVNGGMYM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.664e-30
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ------------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M +  W  VI +NL G FL TQ            G IINI+S+VG VGNIGQ NY+++KAGVIGLT+T A+E     I  N++ PGFIA+ MT K+ E ++ K+   IPLG  G PE+VA +V FLA +  +GYITG  + + GG+ M
Sbjct:  113 MSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLA-SEDSGYITGASVEVSGGLFM 259          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.664e-30
Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ------------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M +  W  VI +NL G FL TQ            G IINI+S+VG VGN+GQ NY+A+KAGVIGLT+T A+E     I  N++ PGFIA+ MT K+ + +  KI E IP+G  G PE+VA +V FLA +  +GYITG  + + GG+ M
Sbjct:  115 MSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLA-SEDSGYITGTSVEVTGGLFM 261          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: DHB8_MOUSE (Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.174e-30
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ------------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M +  W  VI +NL G FL TQ            G IINI+S++G VGNIGQ NY+++KAGVIGLT+T A+E     I  N++ PGFIA+ MT K+ E ++ K+   IPLG  G PE+VA +V FLA +  +GYITG  + + GG+ M
Sbjct:  114 MSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIIGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLA-SEDSGYITGASVEVSGGLFM 260          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK  +W D++  NLT V+  ++           GRIINI SVVG  GN GQ NY AAKAGV+G +K++AKE A+R I VN +APGFIA+DMT  L ++ +  IL  +P GR G+ +++A  V FLA +  AGYITG  L ++GG+ +
Sbjct:   96 MKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEVLTDEQKAGILSNVPAGRLGEAKDIAKAVAFLA-SDDAGYITGTTLHVNGGLYL 241          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = -3
Query:  306 MKKSQWQDVIDLNLTGVFL-----------CTQGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 707
            M +  WQ VI  NLT ++               G IIN+AS+V  +G+ GQ NY+AAKAG+I  TK++AKE A+RNI VN +APGFI +DMT+ L ++L+ + L+ IPLGR G PE+VA +  FLA +  + Y+T Q L +DGG+
Sbjct:  103 MSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMTSVLNDNLKAEWLKSIPLGRAGTPEDVARVALFLA-SQLSSYMTAQTLVVDGGL 246          
The following BLAST results are available for this feature:
BLAST of CX291650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FABG_ECOLI3.961e-3250.343-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_CHLMU8.825e-3249.663-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_CHLTR2.568e-3148.973-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
NODG_AZOBR4.380e-3148.28Nodulation protein G OS=Azospirillum brasilense GN... [more]
FABG_PSEAE1.274e-3048.983-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
DHB8_RAT1.664e-3047.97Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]
DHB8_HUMAN1.664e-3047.97Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
DHB8_MOUSE2.174e-3047.30Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus ... [more]
FABG_HAEIN3.708e-3047.623-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
FABG_CHLPN3.708e-3046.903-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionC03011F11SK OF2 Citrus clementina cDNA clone C03011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291650 ID=CX291650; Name=CX291650; organism=Citrus clementina; type=EST; length=709bp
TTTTTTTTTTTGAAAGCAATTTGAAGACAACATATAGCAGAGTATGTATC
ACCCAAAAACTACATTCCATAATGCCAATTTGAAGTACAACAAATGTTAC
GCGCCTCATGTTTGGTTTTTGCAACATGCTTAGCTTAAATTCTACCAAAA
CTTACCTGAATTTTTATTTCATAACAACACTTTGGCAACATTTCCTCATA
GGATCATAAAGCAGACAAAGTTTCAACCCAGTCGATCTTACATATGAGAG
CTACAGGTCAGAACTGAAACTAAACCAGGCAGAATGGGTCACTGACCTAC
ATAACCATTCCTCCGTCAATAGTAAGCACCTGTCCAGTAATGTAACCGGC
AGCGGGATTGAGGGCCAAGAATTCCACCAGTCCAGCAACTTCTTCAGGTT
GGCCATACCTTCCTAAGGGGATTTTCTCCAAGATCTTCTTTTCTAGGTCT
TCGCCAAGCTTGGCGGTCATATCAGACGCGATGAATCCTGGTGCAATAGC
ATTGACATTAATGTTTCTGCTTGCATATTCCTTTGCAACAGTTTTTGTCA
GGCCAATAACACCTGCTTTTGCAGCACTGTAATTGGCTTGGCCAATATTT
CCAACCAGACCAACAACTGATGCTATATTGATTATTCTTCCCTGTGTACA
CAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCATTGTGACT
TCTTCATTC
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