CX291650

Overview
NameCX291650
Unique NameCX291650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M   +W++VI +NLT VF  ++           GRI+ I SV+G +GN GQ NYSA+K+G+IG  K++A E A + I VN ++PGFI +++T  L     KK L KIP+ R G  EE+A  V FL+ +  A YITGQ + ++GGM M
Sbjct:   98 MSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNLNVFQYKKHLSKIPMKRIGTAEEIANAVIFLS-SEKASYITGQTIHVNGGMYM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: PHBB_CHRVI (Acetoacetyl-CoA reductase OS=Chromatium vinosum GN=phbB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26
Identity = 63/147 (42.86%), Postives = 92/147 (62.59%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M+++ W+ VI++NL  VF  T+           GRIINI+SV G  G  GQANYSAAKAG+ G T  +A+E AS+ + VN I+PG++ + MT  + +D+   I+  IP+ R  QP E+A  + FLA    +GY+TG  L ++GG+ M
Sbjct:  100 MEQAHWEAVINVNLNSVFNVTRQVWDGMLERGFGRIINISSVNGQRGQFGQANYSAAKAGMHGFTMALAQEGASKGVTVNTISPGYVETAMTLAMNDDVRNSIISGIPMRRMAQPNEIAAAIAFLA-GDESGYMTGANLPVNGGLFM 245          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26
Identity = 60/140 (42.86%), Postives = 90/140 (64.29%), Query Frame = -3
Query:  312 SQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 698
            + W  V+++NL GV    +           G I+ I+S+ G  GN+GQ NYSA KAGVIG+ K++A+E A   +  NA+APGFI ++MT  + ED+ +KI ++IP  R+G+PEE+A  V FL    A+ Y+TG+VL ++G
Sbjct:   97 ADWDAVLNVNLKGVAYSIKPFIEGMYERKAGSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMTLAIREDIREKITKEIPFRRFGKPEEIAWAVAFLLSPVASSYVTGEVLRVNG 236          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = -3
Query:  306 GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 641
            G I+NI S+VG  GNIGQ+ Y A+K G+IG +K++AKE A RNI VN +APGFI +DMT  L ED    + + +PLGR+G PEEVA  V FL  +P   YITG VL +DGG+
Sbjct:  127 GAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEED---SLTKMVPLGRFGDPEEVAQSVLFLLESP---YITGHVLVVDGGL 232          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: NOG4_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M    W  V+++NLT +F  T+           GRIIN+ SV G +GN GQ NY A+KAG+IG +K+  +  ++RNI VN +APGFI S MT KL    ++KI+  IP+ R G   EVA  V +LA + AA Y+TGQ + ++GGM M
Sbjct:   99 MADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSWRRR-STRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLASDHAA-YVTGQTIHVNGGMAM 243          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M + ++++VI+ NLTG F C Q           GRII I SV G+ G   QANY+AAKAG+IG+ +++++E A   +  N +APG+I ++MT  L E ++   L+ IP  R G  EEVAG V FLA +  A YI G V+ +DGGM M
Sbjct:  108 MTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRALDERIQAGALDFIPAKRVGTAEEVAGAVSFLA-SEDASYIAGAVIPVDGGMGM 253          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 68/143 (47.55%), Postives = 88/143 (61.54%), Query Frame = -3
Query:  306 KKSQWQDVIDLNLTGVFLCTQ----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 704
            K      V+  NL G  L  +          G I+NI SVVG+ GN GQ  YSA+KAG+ G T+++AKE ASRNI VN +APG I +DMTA L E+     +  IPLGR+G+P EVA  + FL  +P   YITGQ+L +DGG+
Sbjct:   97 KSEDMLSVLHTNLLGSMLTCKAAVRNMLSHGGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMTAGLAEE---AAVRTIPLGRFGEPAEVAQAMLFLLESP---YITGQILLVDGGL 233          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M + +++ VI+ NLTG F   Q           GR+I I SV G  G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG+I +DMT  L E +++  L+ IP  R G P EVAG+V FLA +  A YI+G V+ +DGGM M
Sbjct:  100 MTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDASYISGAVIPVDGGMGM 245          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            M + +++ VI+ NLTG F   Q           GR+I I SV G  G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG+I +DMT  L E +++  L+ IP  R G P EVAG+V FLA +  A YI+G V+ +DGGM M
Sbjct:  100 MTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDASYISGAVIPVDGGMGM 245          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCT-----------QGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   W  V+++NL  +F  +           QG+II I SV+  +GN GQ NYSAAK G++G  K++A E A + I VN IAPG I + MT  L +    K L KIP+ R G  +E++ +  FL  N  A YITGQV+ ++GGM M
Sbjct:   99 MKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNNLSQKQLSKYLSKIPMKRLGTIKEISKITLFLISND-ANYITGQVIHVNGGMYM 244          
The following BLAST results are available for this feature:
BLAST of CX291650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FABG_BUCAP8.547e-2744.223-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
PHBB_CHRVI2.487e-2642.86Acetoacetyl-CoA reductase OS=Chromatium vinosum GN... [more]
FABG2_SYNY33.248e-2642.863-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
CBR4_XENTR7.236e-2655.36Carbonyl reductase family member 4 OS=Xenopus trop... [more]
NOG4_RHIME9.450e-2644.90Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
FABG_MYCS21.234e-2544.223-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
CBR4_DANRE1.234e-2547.55Carbonyl reductase family member 4 OS=Danio rerio ... [more]
FABG_MYCTU2.750e-2544.223-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO2.750e-2544.223-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_BUCBP6.125e-2542.863-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]

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Properties
Property NameValue
Genbank descriptionC03011F11SK OF2 Citrus clementina cDNA clone C03011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291650 ID=CX291650; Name=CX291650; organism=Citrus clementina; type=EST; length=709bp
TTTTTTTTTTTGAAAGCAATTTGAAGACAACATATAGCAGAGTATGTATC
ACCCAAAAACTACATTCCATAATGCCAATTTGAAGTACAACAAATGTTAC
GCGCCTCATGTTTGGTTTTTGCAACATGCTTAGCTTAAATTCTACCAAAA
CTTACCTGAATTTTTATTTCATAACAACACTTTGGCAACATTTCCTCATA
GGATCATAAAGCAGACAAAGTTTCAACCCAGTCGATCTTACATATGAGAG
CTACAGGTCAGAACTGAAACTAAACCAGGCAGAATGGGTCACTGACCTAC
ATAACCATTCCTCCGTCAATAGTAAGCACCTGTCCAGTAATGTAACCGGC
AGCGGGATTGAGGGCCAAGAATTCCACCAGTCCAGCAACTTCTTCAGGTT
GGCCATACCTTCCTAAGGGGATTTTCTCCAAGATCTTCTTTTCTAGGTCT
TCGCCAAGCTTGGCGGTCATATCAGACGCGATGAATCCTGGTGCAATAGC
ATTGACATTAATGTTTCTGCTTGCATATTCCTTTGCAACAGTTTTTGTCA
GGCCAATAACACCTGCTTTTGCAGCACTGTAATTGGCTTGGCCAATATTT
CCAACCAGACCAACAACTGATGCTATATTGATTATTCTTCCCTGTGTACA
CAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCATTGTGACT
TCTTCATTC
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