CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.405e-69
Identity = 130/207 (62.80%), Postives = 154/207 (74.40%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK +F  VGL+   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR+ CP  GN  VL +FD+ TP VFDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  F      FF  FV +M RMGN+ PLTG QGEIRLNCR
Sbjct:  124 SCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCR 330          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 7.059e-69
Identity = 129/207 (62.32%), Postives = 157/207 (75.85%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK++F+NVGL+   DLVALSGAHTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR  CP+ GN  VL +FD+ TP VFDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR
Sbjct:  127 SCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCR 333          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.054e-68
Identity = 127/207 (61.35%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCAD+L IAA+ SV L+GGPSW VP GRRDS      LAN NLP PF TL++LK  F+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V ++   Q  FF  F  +MIRM +L PLTG QGEIRLNCR
Sbjct:  118 SCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCR 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.966e-67
Identity = 125/207 (60.39%), Postives = 150/207 (72.46%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP-GADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGP  TL +LK  F+NVGL+   DLVALSG HTFG++QCQF   RLY+F  TG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNKY+ NL+  KGL+QSDQELFS+P  ADT  +V  +   Q  FF  FV ++IRM +L PLTG QGEIRLNCR
Sbjct:  118 SCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCR 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.510e-66
Identity = 120/207 (57.97%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SC+D+L +A+E SV+L+GGPSW V LGRRDS TAN A AN ++P P ++L  +   F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFST G+ T AIV  F  NQ  FF+ F  SMI MGN+ PLTG+ GEIRL+C++
Sbjct:  126 SCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKK 331          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 7.304e-66
Identity = 121/207 (58.45%), Postives = 151/207 (72.95%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SC+DIL +A+E SV+L+GGPSW V LGRRDS TAN A AN  +P PF+ L  + S F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ T  PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFST G+ T A+V  F  NQ  FF+ F  SMI MGN+ PLTG+ GEIRL+C++
Sbjct:   96 SCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKK 301          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.235e-64
Identity = 118/206 (57.28%), Postives = 149/206 (72.33%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SC+DIL +A+E SV+L+GGPSW V LGRRD  TAN + AN +LP PF+ L+ + S F  VGL    D+V+LSGAHTFGR QC  F  RL++FN TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFS  G+ T  IV  F  NQ  FF+ FV SMI+MGN+ PLTG+ GEIR +C+
Sbjct:  127 SCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTT-DVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCK 331          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.559e-63
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL +A+E  V L+ GPSW V  GR+DS TANR+ AN ++P PF+TL  +   F N G+ D  DLVALSGAHTFGRA+C  F  RL++FN +G PD T+DATFLQ L+ +CPQGGN G    N D++TP+ FDN YF+NL+  +GLLQ+DQELFST G+ T AIV  +  +Q  FF +FV+SMI++GN+ PLTG  G+IR +C+R
Sbjct:  116 SCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKR 322          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.057e-56
Identity = 119/208 (57.21%), Postives = 146/208 (70.19%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN-NTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL IAAE SVAL+GGPS  V LGRRD RTA RA A   LP   D+L+ L S F    L D  DLVALSGAHTFGR QC     RL++F+ N+G+ DP+++  FLQ LR+ CPQGG+    AN D T+PD FDN YF NL+  +G+++SDQ LFS+ GA T ++V  F  NQN FF NF  SMI+MGN++ LTG +GEIR +CRR
Sbjct:  121 SCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNL-DTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRR 327          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.895e-55
Identity = 115/207 (55.56%), Postives = 136/207 (65.70%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL IA+  SV L+GGP W V LGRRDSR AN   A   LP PF+ + +LK  F  V L D  DLVALSGAHTFG+++CQFF  RL    N   PD TL+  + QQLR+ C  G +     N D TTP+ FD  Y++NL+   G L SDQ L STPG DT  IV  F  +QN FF++F  SMI MGN++PLTGNQGEIR NCRR
Sbjct:   91 SCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRD--TFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRR 290          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER1B_ARMRU5.405e-6962.80Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER33_ARATH7.059e-6962.32Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER37_ARATH2.054e-6861.35Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER38_ARATH2.966e-6760.39Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER53_ARATH2.510e-6657.97Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERA2_ARMRU7.304e-6658.45Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER54_ARATH5.235e-6457.28Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERX_TOBAC7.559e-6356.73Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER58_ARATH1.057e-5657.21Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_CUCSA9.895e-5555.56Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
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