CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.262e-53
Identity = 112/208 (53.85%), Postives = 137/208 (65.87%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADILT+AA  SV LSGGP W V LGR+D   AN++ AN NLP PF+ LD + + F  VGLN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ T L  L+ +CP GGNG   A  D  + D FDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF++F  SMIRMG+L  + G  GE+R NCR
Sbjct:  121 SCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSAN-NLPSPFEPLDAIIAKFAAVGLN-VTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCR 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.519e-52
Identity = 103/207 (49.76%), Postives = 137/207 (66.18%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCAD+LT+AA  S  L+GGPSW VPLGRRDSR+A+ + +N N+P P +T   + S F   GL D  DLVALSG+HT G ++C  FR RLY+ +  G PD TL+ +F   LR+ CP+ G   +L+  D+ +   FDN YF NL   KGLL SDQ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR+
Sbjct:  124 SCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGL-DITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAASFDNSYFKNLIENKGLLNSDQVLFSS-NEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRK 328          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.024e-51
Identity = 109/208 (52.40%), Postives = 136/208 (65.38%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADILT+AA  SV LSGGP W V LGR+D   AN+  AN NLP PF+ LD + + F  V LN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ + L  L+ +CP GGN  + A  D +T D FDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q+ FF++F  +MIRMGN+    G  GE+R NCR
Sbjct:  121 SCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNIT-DVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCR 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.082e-51
Identity = 105/207 (50.72%), Postives = 133/207 (64.25%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADILT+AA  SV   GGPSW VPLGRRDS TA+ +LAN +LPGP  +  +L+++F    LN  +D+VALSGAHT G+AQC  FR R+Y        D  ++  F   L+  CPQ G    LAN D  TP+ FDN Y++NL  +KGLL SDQ LF+    D    V +F  N  AF   F T+MI+MGN+ PLTG QG+IRL+C +
Sbjct:  112 SCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNFRTRIYG------GDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNT--VRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSK 309          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.635e-49
Identity = 107/205 (52.20%), Postives = 134/205 (65.37%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADILT+AA  + A  GGPSW V LGRRDS TA++ LA  +LPGPFD L+ L SSF + GL+ + D+VALSGAHT G+AQC  FR R+Y  N T      +DA F    R+ CPQ G  G LA  D+ TP+ FDN YF NL  +KGLLQSDQ LF+  G  T  IV ++  +  AF  +F  +MI+MG++ PL+G  G IR  C
Sbjct:  123 SCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTR-DMVALSGAHTIGQAQCFLFRDRIYS-NGT-----DIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFN--GGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVC 318          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.789e-49
Identity = 101/207 (48.79%), Postives = 133/207 (64.25%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL +AA  S  ++GGPSW VPLGRRD+R A+ + +N ++P P +T   + + F+  GL D +DLV+LSG+HT G ++C  FR RLY+ +  GKPD TL   +   LR+ CP+ G    L   D  TP  FDN YF NL   KGLL SD+ LF T    +  +VE +  NQ AFF+ F  SM++MGN+ PLTG +GEIR  CRR
Sbjct:  127 SCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGL-DLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILF-TKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRR 331          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.789e-49
Identity = 98/207 (47.34%), Postives = 135/207 (65.22%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCAD LT+AA  S  L+GGPSW VPLGRRDS +A+ + +N N+P P +T + + + F N GL D  D+VALSG+HT G ++C  FR RLY+ +  G PD TL+ ++   LR+ CP+ G    L+  D+ +   FDN YF NL    GLL SD+ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR+
Sbjct:  130 SCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGL-DLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSS-NEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRK 334          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.757e-49
Identity = 101/207 (48.79%), Postives = 133/207 (64.25%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCAD LT+AA  S  L+GGPSW VPLGRRDS TA+RA  N++LP P +  D +   F N GLN   DLVALSG+HT G ++C  FR RLY+ + +G PD TL+ ++   LR+ CP+ G    L+  D+ +   FDN YF NL    GLL SDQ LFS+    +  +V+ +  +Q  FF+ F  SMI+MG + PLTG+ GEIR  CR+
Sbjct:  129 SCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLN-LTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSS-NEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRK 333          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.808e-48
Identity = 105/209 (50.24%), Postives = 131/209 (62.68%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADILT+AA  SV   GGPSW VPLGRRDS  AN   AN +LPG   +  EL+++F   G  + +D+VALSGAHT G+AQC  FR R+Y        D  ++A +   LR  CPQ  G   G LAN D TT + FDN Y++NL  +KGLL SDQ LF+    D    V +F  N  AF  +F T+MI+MGN+ P TG QG+IRL+C R
Sbjct:  112 SCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNT--VRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSR 312          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.083e-48
Identity = 97/205 (47.32%), Postives = 131/205 (63.90%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA  S  LSGGPSW +PLGRRDSRTA+   AN N+P P  T+  L + F+  GLN++ DLV+LSG HT G A+C  F+ RLY+ N   +PD TL+ ++   LR +CP  G    ++  D+ +P  FDN YF  L   KGLL SD+ L +     T A+V+ +  ++  FF+ F  SM+ MGN++PLTG  GEIR +C
Sbjct:  139 SCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEE-DLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSC 342          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PERN_ARMRU9.262e-5353.85Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER49_ARATH3.519e-5249.76Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER59_ARATH1.024e-5152.40Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1_WHEAT5.082e-5150.72Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PERX_NICSY1.635e-4952.20Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER72_ARATH2.789e-4948.79Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER15_ARATH2.789e-4947.34Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER14_ARATH4.757e-4948.79Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER1_HORVU1.808e-4850.24Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER9_ARATH3.083e-4847.32Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
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