CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.135e-42
Identity = 94/207 (45.41%), Postives = 132/207 (63.77%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL IAA  SV   GGP+W V +GRRD++TA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+    G   LA  D+ +   FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  + ++F  +F  +MI+MG++ PLTG+ GEIR  C
Sbjct:   96 SCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCVNFRARVYNETN-------INAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFN--GGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVC 292          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.135e-42
Identity = 95/205 (46.34%), Postives = 131/205 (63.90%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+ FDN Y+ NL  +KGLL+SDQ LF T GA T +IV ++ RN + F  +F  +MI+MG+++ LTG+ G+IR  C
Sbjct:  115 SCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSSD------IDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGT-GASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRIC 311          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.482e-42
Identity = 99/209 (47.37%), Postives = 128/209 (61.24%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF----GRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP  FD++D  K  F   GLN + DLVAL+GAHT G A C   R RL++FN+TG PDP++DATFL QLR LCPQ G+       D  + + FD  YFSNLR  +G+L+SDQ+L++   A T   V+ F    G     F   F  SM++M N++  TG  GEIR  C
Sbjct:  122 SCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVDIQKRKFLTKGLNTQ-DLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWT--DASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVC 326          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.936e-42
Identity = 99/210 (47.14%), Postives = 130/210 (61.90%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D +F    R+ CP   G      A  D+ TP+ FD  YF  L   +GLL SDQ LF+  G  T +IV  + R+  AF+++FV +MI+MG++ PLTG+ G+IR +CRR
Sbjct:  124 SCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFN--GGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRR 323          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.528e-42
Identity = 96/205 (46.83%), Postives = 126/205 (61.46%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA   V   GGPSW V LGRRDS TA+ A    +LP P  +L +L S++    LN   D+VALSGAHT G+AQC  F   +Y+       D  +++ F   LR  CP+ G+   LA  D TTP+ FDN Y++NL  +KGLL SDQELF++   D+   V  F  + +AF   F T+M++MGNL P TG QG+IR +C
Sbjct:  123 SCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPT-DMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRAGSTA-LAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDST--VRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.302e-42
Identity = 99/206 (48.06%), Postives = 121/206 (58.74%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SC+DIL +AA  SV LSGGP +AVPLGRRDS   A++     NLP PF    +L + F N  LN   DLVALSG HT G A C  F  RLY        DPT++  F   L++ CP   +     N D+ +PDVFDNKY+ +L  R+GL  SDQ+LF      T  IVE F  +Q  FF  F  +MI+MG +  LTG QGEIR NC
Sbjct:  139 SCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLYP-----NQDPTMNQFFANSLKRTCPTANSSNTQVN-DIRSPDVFDNKYYVDLMNRQGLFTSDQDLF--VDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNC 335          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.227e-41
Identity = 95/208 (45.67%), Postives = 124/208 (59.62%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFK-NFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADI+T+A   SVAL+GGPS+++P GRRD R +N    +  LPGP  ++    S F N G+N   D VAL GAHT G+  C  F  R+  F  TG+PDP++D   +  LR  C         A  D ++P  FDN++F  +R R+G+LQ DQ L S P   T  IV  +  N NAFFK  FV +M++MG +  LTG  GEIR NCRR
Sbjct:  114 SCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNNL--DVTLPGPTISVSGAVSLFTNKGMNT-FDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTC----RNSATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDP--QTRGIVARYA-NNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRR 311          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.812e-40
Identity = 94/205 (45.85%), Postives = 118/205 (57.56%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA   V   GGPSW V LGRRDS T +      +LP P  +L  L +++    L D  D+VALSGAHT G+AQC  F G +Y+       D  ++A F   L+  CP  G G  LA  D  TP VF N Y+ NL  +KGLL SDQELF+    D+   V +F  +  AF   F  +M++MGNL PLTG  G+IRL C
Sbjct:  123 SCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKANCPMSG-GSSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDST--VSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTC 315          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.812e-40
Identity = 95/209 (45.45%), Postives = 120/209 (57.42%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF----GRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA  SV LSGG SW VP GRRD R + +A    NLP P D++D  K  F   GLN + DLV L G HT G ++CQFF  RL++FN T   DP +D +F+  L+ LCPQ          D  +   FD  YFSNLR R+G+LQSDQ L++ P   T + V+ +    G     F   F  SM++M N+   TG  GEIR  C
Sbjct:  122 SCADILALAARDSVVLSGGLSWQVPTGRRDGRVS-QASDVSNLPAPSDSVDVQKQKFAAKGLNTQ-DLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDP--STKSFVQRYLGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKIC 326          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.366e-40
Identity = 87/207 (42.03%), Postives = 127/207 (61.35%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL +A    V L+GGPS+ V LGRRD R + +A     LP P   L++L   F   GL+ + D++ALSGAHT G A C     R+Y+F+ T + DP+++  ++ QL+++CP G +  +  N D T+P  FDN YF NL+  KGL  SDQ LF+     + + V  F  ++ AF + F+T++ ++G +  LTGN GEIR +C R
Sbjct:  120 SCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFT--DQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSR 323          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PERP7_BRARA1.135e-4245.41Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER4_ARATH1.135e-4246.34Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERN1_TOBAC1.482e-4247.37Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER68_ARATH1.936e-4247.14Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER66_MAIZE2.528e-4246.83Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER12_ARATH3.302e-4248.06Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER57_ARATH6.227e-4145.67Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER42_MAIZE1.812e-4045.85Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER2_ARAHY1.812e-4045.45Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER45_ARATH2.366e-4042.03Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
back to top