CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.875e-37
Identity = 91/208 (43.75%), Postives = 122/208 (58.65%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQ-GEIRLNCR 618
            SC+DIL IAA   + L+GGP + V  GR D + +       N+P    T+D+L   F + GL  + +LV LSG+HT G A C+ F GRLYD+  T +PDP+LD   L++LR  CP  GG+ GV+   D TTP VFDN YF+ L    GLL SDQ LF  P   T  I  +  R++  F K F  +M +MG++    G + GEIR +CR
Sbjct:  139 SCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDP--RTKPIALEMARDKQKFLKAFGDAMDKMGSIGVKRGKRHGEIRTDCR 343          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.124e-37
Identity = 85/205 (41.46%), Postives = 121/205 (59.02%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P   L++L + F   GL+   D++ALSGAHT G A C     RLY+FN T   DPT++  ++ +L+  CPQ  +  V  N D  TP  FDN Y+ NL+  KGL  SDQ LF+   + +   V+ +  N   F + F++SMI++G +   TG+ G IR +C
Sbjct:  124 SCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFT--DSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDC 325          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.305e-37
Identity = 96/210 (45.71%), Postives = 123/210 (58.57%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN--NTGKPDP-TLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP-GADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P  +LD L  +F+  GLN + DL+ALSGAHT G+A+C  F+ R+   N   T   D     +TF + L   C        L+  D+ TP  FDN YF NL   +GLL SD  L S     +    V ++  NQ+ FF +FV SM++MGN+  LTG +GEIR NCR
Sbjct:  124 SCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCR 332          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.618e-36
Identity = 90/210 (42.86%), Postives = 124/210 (59.05%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG---NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCADIL++AA  +VALSGGP+WAVP GR+D R + +A+  + LP P   + +L+ +F   GL+   DLVALSG HT G A C  F+ RL+ FN   + DPTL+ +F  +L  +CP      N G  +N D T    FDN Y+  L   K L  SD+ L + P   T  +V  +  +   F + FV SMI+M +   ++GN  E+RLNCRR
Sbjct:  116 SCADILSLAARDAVALSGGPTWAVPKGRKDGRIS-KAIETRQLPAPTFNISQLRQNFGQRGLSMH-DLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAG--SNMDGTVTS-FDNIYYKMLIQGKSLFSSDESLLAVP--STKKLVAKYANSNEEFERAFVKSMIKMSS---ISGNGNEVRLNCRR 315          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.029e-35
Identity = 84/207 (40.58%), Postives = 116/207 (56.04%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG-NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADI+  AA  SV ++GG  + VP GRRD R +  + A+ NLP P  T+D+L   F N GL    ++V LSGAHT GR+ C  F  RLY+FN T   DPTLD  +   L+  CPQG  N  ++   + ++P + D  Y+ ++   +GL  SDQ L +     TA  V     N   +   F ++M++MG L  L G  G+IR NCR
Sbjct:  155 SCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLT--DTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCR 358          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.344e-35
Identity = 85/205 (41.46%), Postives = 118/205 (57.56%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADILT+A    V L+GGP + V LGR D  ++  A     LP P D +++L S F   GL+   D++ALSGAHT G A C     R+Y FN T K DPT++  ++ +L+  CP+  +  V  N D TTP  FDN Y+ NL+  KGL  SDQ LF+     +   V+ +  N   F + F+ SMI++G +   TG+ G IR +C
Sbjct:  124 SCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFT--DRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDC 325          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.755e-35
Identity = 86/205 (41.95%), Postives = 115/205 (56.10%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP + + EL   F    L  + D++ALS AHT G A C     R+Y+FN T   DPTL+  + ++L+  CP+  +  +  N D TTP  FDN YF NL+  KGL  SDQ LF+     +   V D+ +N  AF K FVT+M ++G +   T   G IR +C
Sbjct:  124 SCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFT--DGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDC 325          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35
Identity = 85/211 (40.28%), Postives = 120/211 (56.87%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-----VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADIL +A   +V ++G PS+ V  GRRD  T N    +  LP P  ++DE  + F++ GL D LD+  L GAH+ G+  C +   RLY+F NTGKPDPT++ T + QLR LCP     G     V  N D  + + F + Y+S +     +L+ DQEL +    D+  I ++F      F K+F  +M RMG++  LTG  GEIR +CR
Sbjct:  127 SCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNND--DSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCR 332          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.106e-35
Identity = 83/207 (40.10%), Postives = 114/207 (55.07%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF-GRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+ + A  +V  +GGPSW+VP GRRD R +N+  A  N+P P      L+  F+N GLN K DLV LSGAHT G + C     RLY+F+ T K DP+LD+ +   L+   C    +   +   D  +   FD  Y+  +  R+GL QSD  L  T  + T  ++ D    ++  FFK F  SM +MG +K  TG+ G IR  C
Sbjct:  121 SCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLK-DLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSAL--TTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRC 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.668e-35
Identity = 84/206 (40.78%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SC+DIL + A  ++    GPSW V  GRRD R +N  +   NLP PFD + +L S FR+ GLN+K DLV LSG HT G   C     RLY+F   G  DP+LD+ +  +LRK C        L   D  +   FD  YF+ +  R+GL QSD  L        A +++    + + FF +F  SM++MG    LTG  GEIR  CR
Sbjct:  118 SCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPTDTTTAL-EMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDN-SKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCR 318          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER19_ARATH1.875e-3743.75Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER51_ARATH7.124e-3741.46Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER20_ARATH9.305e-3745.71Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER64_ARATH4.618e-3642.86Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER5_VITVI1.029e-3540.58Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER50_ARATH1.344e-3541.46Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER73_ARATH1.755e-3541.95Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER61_ARATH2.993e-3540.28Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER30_ARATH5.106e-3540.10Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER27_ARATH6.668e-3540.78Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
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