CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.534e-34
Identity = 87/208 (41.83%), Postives = 116/208 (55.77%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVE---DFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADILT+AA  +V L+GG  W VPLGR D R +  +  + NLPGP D++ + K  F    LN  LDLV L G HT G A C   RGR  +FN TG+PDP++D +F+  +   CPQ  NGG     D  + D FD  +   +   + +LQSD  L+  P  +T AI+E      R    F   F  SM++M  ++  TG+ GEIR  C
Sbjct:  127 SCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNT-LDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ--NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDP--ETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVC 327          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.645e-34
Identity = 82/206 (39.81%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+T+A   S+   GGP+W VP GRRD R +N A A  N+P PF     L + F N GL+ K DLV LSGAHT G + C  F  RL++F   G  DP+LD+ +   L+ + C    +       D  + + FD  Y+  +  R+GL +SD  L   P A  A +    G ++  FF  F  SM +MG +   TG+ GEIR  C
Sbjct:  119 SCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVK-DLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAA-LAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTC 322          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.645e-34
Identity = 80/205 (39.02%), Postives = 111/205 (54.15%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGP D +D+L + F    L  + D++ALS AHT G A C     R++ FN     DPTL+  +  +L+K CP+  +  +  N D  TP  FDN YF NL+  KGL  SDQ LF+     +   V  +  N  AF + FV +M ++G +     + G IR +C
Sbjct:  124 SCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFT--DGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDC 325          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.373e-34
Identity = 82/210 (39.05%), Postives = 123/210 (58.57%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFF-----KNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SC+DI+ +AA  +++L+ GP++ VP GRRD R +N +LA +++P   D+++ LK+ F   GLN K DLV LS AHT G   C F   RLYDF   G+PDPT++ TFL +L   CPQ G+  V    D  +  +FD +   N++    +LQ+D  L+      T  +V+ +    N FF      +FV ++++MG +   TG +GEIR  C
Sbjct:  117 SCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYE--DVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVC 322          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.629e-34
Identity = 79/206 (38.35%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+ +A+  +V  +GGP+W+VP GRRD R +N A A  N+P P   +  L++ F N GL D  DLV LSGAHT G + C  F  RLY+F   G  DP LD+ +   L+ + CP   +   +   D  +   FD  Y+  +  R+GL QSD  L + P    + I      +  +FF  F  SM +MG +   TG+ G +R  C
Sbjct:  118 SCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNP-TTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQC 321          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.642e-33
Identity = 85/207 (41.06%), Postives = 118/207 (57.00%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDV-TTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCAD++ IAA   V LSGGP W+V  GR+D  T +RA   +NLP P   + +L  SF   GL+ K D+V LSG HT G + C  F  RL +F+     DP+++  F Q L+K CP+  N G  A   + +T  VFDN Y+  +   KG+  SDQ L     + T  IVE F ++Q AFF+ F  SM+++GN        G++R+N R
Sbjct:  119 SCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTSSVFDNVYYKQILSGKGVFGSDQALLG--DSRTKWIVETFAQDQKAFFREFAASMVKLGNFG--VKETGQVRVNTR 319          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.642e-33
Identity = 83/205 (40.49%), Postives = 112/205 (54.63%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA   V L GGP + V LGRRD   +  +     LP P   +  L   F + GL+   D++ALSGAHT G + C  F  RL++F+     DPT+D  + QQL + C    N   + + D+T+ D FDN Y+ NL  RKGL  SDQ LF+     + A V  F  N   F+  F ++M  +G +    GNQGEIR +C
Sbjct:  126 SCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFN--DLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDC 326          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.802e-33
Identity = 84/209 (40.19%), Postives = 116/209 (55.50%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELF----STPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP PF  +  LK +F N GLN K DLV LSG HT G + C     RLY+F   G  DP+++ +++++L++ CP       L N D  +   FD  YF  +  +KGL  SD  L     +     T AI+       ++F K+F  SM+++G ++ LTG  GEIR  C
Sbjct:  118 SCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSL-NMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPV---FSSFNKDFSDSMVKLGFVQILTGKNGEIRKRC 321          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.390e-32
Identity = 84/208 (40.38%), Postives = 114/208 (54.81%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFF---KNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP D++   K  F    LN + DLV L+  HT G A C  FR R ++++NTG PDPT+  +F+  ++  CP  G+       D  + D FD  Y +NL+  +GLL+SDQ L++    +T  IVE     +  F      F  SM +M  ++  TG  GEIR  C
Sbjct:  124 SCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWT--NLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVC 326          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.390e-32
Identity = 78/206 (37.86%), Postives = 105/206 (50.97%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SC+D+L + A  ++    GPSW V  GRRD    N   A  NLP PF+ +  L + F++ GL DK DLV LSG HT G   C     RLY+F   G  DP LD  +  +LR  C        L   D  +   FD  YF  +  R+GL QSD  L        + +++    + + FFK+F  SM++MG +  LTG  GE+R  CR
Sbjct:  124 SCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPTDTTTAL-EMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQ-ETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCR 326          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER69_ARATH2.534e-3441.83Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER39_ARATH5.645e-3439.81Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER35_ARATH5.645e-3439.02Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER43_ARATH7.373e-3439.05Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER3_ARATH9.629e-3438.35Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER66_ARATH1.642e-3341.06Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER55_ARATH1.642e-3340.49Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER1_ARATH2.802e-3340.19Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER70_ARATH1.390e-3240.38Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER56_ARATH1.390e-3237.86Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
back to top