CX291665

Overview
NameCX291665
Unique NameCX291665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.097e-32
Identity = 87/206 (42.23%), Postives = 117/206 (56.80%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADI+ +AA  +V  +GGP + +P GR D + + +    +NLP PF    +L  +F   G   + D+VALSGAHT G A+C  F+ RL        PD +LD+TF   L K C  G N      FD T  D FDN YF+ L+ + G+L SDQ LF+TP   T  +V  +  NQ  FF +F  +M +M NL    G+QGE+R NCR
Sbjct:  119 SCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRS-KIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARLT------VPDSSLDSTFANTLSKTCSAGDNAE--QPFDATRND-FDNAYFNALQMKSGVLFSDQTLFNTPR--TRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGSQGEVRQNCR 311          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 5.284e-32
Identity = 80/211 (37.91%), Postives = 117/211 (55.45%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-----VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 618
            SCADIL +A   +V L+G PS+ V  GRRD  T+++   +  LP P  + D+  S F++ GLN  LD+  L G+H+ GR  C +   RLY++N TGKP PT++  FL ++ K CP     G     V  N D  +   F + ++S +   K +L+ DQ+L      DT  I ++F      F K+F  SM +MG +  LT  +GEIR +CR
Sbjct:  127 SCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYND--DTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCR 332          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.537e-31
Identity = 87/211 (41.23%), Postives = 113/211 (53.55%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDF---NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRN-QNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCAD+L + A  +V LS GP WAVPLGRRD R    ++AN+   LP P     EL   F    L D  DLV LS  HT G + C  F  RLY+F   +N    DPTL+  ++ +LR  C    +   L   D  +   FD  YF N+  R+GL  SD EL  T G   A +    G   ++ FF +F  SM++MG ++ LTG+QGEIR  C
Sbjct:  117 SCADVLALMARDAVWLSKGPFWAVPLGRRDGRV---SIANETDQLPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELL-TNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKC 322          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.899e-30
Identity = 80/206 (38.83%), Postives = 115/206 (55.83%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP P   + +L   F + G + + ++VALSGAHT G + C+ F  R+   N+TG      +  F   L+K C    N   ++ F DV TP+ FDN YF N+    GLL+SD  LFS P   T   VE + R+Q+ FF +F  +M ++     LTG +GEIR  C
Sbjct:  127 SCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG-----YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDP--RTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRC 324          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30
Identity = 82/210 (39.05%), Postives = 114/210 (54.29%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFK-NFVTSMIRMGNLKPLTGNQ--GEIRLNCRR 621
            SCADILT A+  +    GGP W    GRRDS+ +  A   + +P     +  L  +F++ GLN  LDLV LSGAHT G+A C   + RLY++N T   DP++DA +   L++ C          + D  TP VFDN+Y+ NL+   G+L +DQEL   P   TA +V+ F       F+  F  SM ++ N+  LTG    GEIR  C +
Sbjct:  141 SCADILTSASRAATVQLGGPYWPNVYGRRDSKHSY-ARDVEKVPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCRWASE---TVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDP--RTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSK 343          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29
Identity = 80/210 (38.10%), Postives = 112/210 (53.33%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN---TGKPDPTLDATFLQQLRKLCPQG--GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+  AA  S++L+G  S+ VP GRRD R +N A    +LP P  T   L   F+   L+ + D+V LSGAHT GR+ C  F  R+++ +    T   D  L  ++ Q LR LCP        +    D  TP+V DN Y+  L    GL  SD +L   P    AA+V  F  N+  + + F  +M++MG ++  TG  GE+RLNC
Sbjct:  130 SCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNC 335          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 77/206 (37.38%), Postives = 115/206 (55.83%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP P   + ++   F + G   + ++VALSGAH+ G + C+ F GR+   NNTG      +  F   L+K C        ++ F D+ TP+ FDN Y+ NL+   GLL+SD  L+S P   T   V+ + +NQ+ FFK+F  +M ++      TG +GEIR  C
Sbjct:  116 SCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTG-----YNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP--RTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRC 312          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 84/210 (40.00%), Postives = 118/210 (56.19%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF-GRNQNA---FFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+  V    D  +  VFDN+ F N++  +G++ SD  L+     +   I++ +   NQ++   F  +F  +MI+MG +    G +GEIR  C
Sbjct:  116 SCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQ--DNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLC 315          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 78/242 (32.23%), Postives = 115/242 (47.52%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTP----------------------------------DVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 621
            SCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+  CP         A  D+  P                                  + F  +YF  L   KGL+ SDQ+L  +    T   V  +  +   F + F  SM+++ +   LTG  G++R +C +
Sbjct:  161 SCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGS--EVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSK 399          
BLAST of CX291665 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 79/206 (38.35%), Postives = 105/206 (50.97%), Query Frame = 1
Query:    1 SCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 615
            SCADIL  A    V + GGP + V LGR+D   +       NLP    ++ ++ S F+  G   K +LVALSG HT G + C+ F  R++      K DP L+A F   L+ LC        +A F D  TP  FDN YF NL+   GLL SD  LF  P   T   VE +  NQ AFF++F  +M ++G +       GE+R  C
Sbjct:  121 SCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLK-ELVALSGGHTIGFSHCKEFSNRIFP-----KVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDP--STRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRC 318          
The following BLAST results are available for this feature:
BLAST of CX291665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER47_ARATH3.097e-3242.23Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER26_ARATH5.284e-3237.91Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER1_ORYSJ1.537e-3141.23Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER63_ARATH2.899e-3038.83Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER7_ARATH6.459e-3039.05Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER1_MAIZE7.141e-2938.10Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER31_ARATH4.629e-2837.38Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER13_ARATH4.629e-2840.00Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER48_ARATH7.895e-2832.23Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER41_ARATH7.895e-2838.35Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03011H04SK OF2 Citrus clementina cDNA clone C03011H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291665 ID=CX291665; Name=CX291665; organism=Citrus clementina; type=EST; length=623bp
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTC
AGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGG
CAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTT
GATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGA
TCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAAT
TTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCA
ACCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGG
TGGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTT
TCGACAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAG
AGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGT
CGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCT
CAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGT
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