CX291672

Overview
NameCX291672
Unique NameCX291672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 5.113e-39
Identity = 85/186 (45.70%), Postives = 110/186 (59.14%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYVRVS 583
            ++REI N +  +HP+II+  +V  TPT+  +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G   D+WSCGV LY +L G  PF+D   P  FKK    I    + IP Y+  S
Sbjct:   61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGGVFYIPDYLNRS 240          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.678e-39
Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYS----KSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            ++REI+  + + HPN ++  EV+ T   L +++EY  GGELF+ +   G     EA +FFQQ+I G+ YCHS  ICHRDLK EN LL G K  R+KI DFG      K  +LH    ++ G+P Y +PEV+S  +YDG+ ADVWSCGV LY +L G  PF+D     N ++ + ++ +  +S+P Y+
Sbjct:   55 IEREIVLMKLIDHPNAMKMYEVYETSKYLFLILEYVEGGELFDYLVEKGGLESGEALFFFQQIIIGLEYCHSRNICHRDLKPENLLLSGDK--RIKIADFGMGSIVRKDMLLH----TSCGSPHYASPEVVSGIDYDGQKADVWSCGVILYALLTGKLPFDD----ENIRRLLNKVKNGAFSMPPYI 231          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.678e-39
Identity = 80/167 (47.90%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            ++REI N +  +HP+II+  +V  TPT+  +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G   D+WSCGV LY +L G  PF+D   P  FKK
Sbjct:   61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 225          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 6.678e-39
Identity = 80/167 (47.90%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            ++REI N +  +HP+II+  +V  TPT+  +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G   D+WSCGV LY +L G  PF+D   P  FKK
Sbjct:   61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 225          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39
Identity = 82/172 (47.67%), Postives = 110/172 (63.95%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-----VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            ++REI   + ++HPNI+R  EV    T++ I++E   GGELF++I   G+  E+EAR +FQQLI  ++YCHS  + HRDLK EN LLD      LK+ DFG S  +     +LH    +T GTP Y+APEVLS   YDG  ADVWSCGV LYV++ G  PFE+ + P  + K
Sbjct:   63 IKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYCHSKGVYHRDLKPENLLLD--SRGNLKVSDFGLSTLAQKGVGLLH----TTCGTPNYVAPEVLSNNGYDGSAADVWSCGVILYVLMAGYLPFEEDDLPTLYDK 228          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39
Identity = 80/167 (47.90%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            ++REI N +  +HP+II+  +V  TPT+  +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G   D+WSCGV LY +L G  PF+D   P  FKK
Sbjct:   61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 225          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.139e-38
Identity = 80/167 (47.90%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            ++REI N +  +HP+II+  +V  TPT+  +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G   D+WSCGV LY +L G  PF+D   P  FKK
Sbjct:   61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNIMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 225          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.943e-38
Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 2
Query:   14 IDEHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGY 571
            + E ++REI   R + H NI++  EV  T  ++  VMEY  GGELFE++   G+ +E  A  +FQQLIS V YCHS  + HRDLK EN LLD ++   LK+ DFG S  S    Q     +T GTPAY+APEV+S+  YDG  +D+WSCGV L+V++ G  PF+ P    N  +  ++I    +  PG+
Sbjct:   53 LSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENE--NLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGP----NLMEMYRKIQHGEFRCPGW 235          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.943e-38
Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 2
Query:   14 IDEHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGY 571
            + E ++REI   R + H NI++  EV  T  ++  VMEY  GGELFE++   G+ +E  A  +FQQLIS V YCHS  + HRDLK EN LLD ++   LK+ DFG S  S    Q     +T GTPAY+APEV+S+  YDG  +D+WSCGV L+V++ G  PF+ P    N  +  ++I    +  PG+
Sbjct:   53 LSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENE--NLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGP----NLMEMYRKIQHGEFRCPGW 235          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.538e-38
Identity = 81/175 (46.29%), Postives = 109/175 (62.29%), Query Frame = 2
Query:   23 HVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            +++REI   R L HPNI++  EV  T +++   ME+  GGELF +I   GR SED +R +FQQLIS V YCH+  + HRDLK EN L+D  +   LK+ DFG S          +LH    +  GTPAY+APE+LS+K Y+G   DVWSCG+ L+V++ G  PF DP     +KK
Sbjct:   66 NIKREISIMRRLSHPNIVKLHEVMATKSKIFFAMEFVKGGELFNKISKHGRLSEDLSRRYFQQLISAVGYCHARGVYHRDLKPENLLID--ENGNLKVSDFGLSALTDQIRPDGLLH----TLCGTPAYVAPEILSKKGYEGAKVDVWSCGIVLFVLVAGYLPFNDPNVMNMYKK 234          
The following BLAST results are available for this feature:
BLAST of CX291672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK2_MOUSE5.113e-3945.705'-AMP-activated protein kinase catalytic subunit ... [more]
Y7165_DICDI6.678e-3943.32Probable serine/threonine-protein kinase DDB_G0277... [more]
AAPK2_RAT6.678e-3947.905'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG6.678e-3947.905'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKO_ORYSJ8.722e-3947.67CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
AAPK2_HUMAN8.722e-3947.905'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PONAB1.139e-3847.905'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKF_ORYSJ1.943e-3843.92CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CIPKE_ORYSJ1.943e-3843.92CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKB_ARATH2.538e-3846.29CBL-interacting serine/threonine-protein kinase 11... [more]

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Properties
Property NameValue
Genbank descriptionC04002A03SK FlavFr1 Citrus clementina cDNA clone C04002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291672 ID=CX291672; Name=CX291672; organism=Citrus clementina; type=EST; length=583bp
GCACGGGCAGAAGATTGATGAGCATGTTCAGAGGGAGATTATGAACCACA
GGGCCTTGAAGCATCCTAATATAATAAGATTTAAGGAAGTCTTTTTAACC
CCAACTGAACTAGCCATAGTCATGGAATACGCAGCTGGCGGCGAACTTTT
CGAGAGGATATGCAGTGCTGGCAGATTCAGCGAGGACGAGGCACGATACT
TCTTTCAACAGCTAATATCCGGAGTAAGCTACTGTCATTCAATGCAAATT
TGCCATAGAGATCTTAAGTTGGAAAACACACTCTTGGATGGTAGCAAGGC
ACCACGTCTCAAAATATGTGACTTCGGCTACTCCAAGTCCTCAGTGTTGC
ACTCGCAACCCAAATCCACCGTTGGAACCCCGGCCTACATCGCGCCTGAG
GTTTTGTCTAGAAAAGAGTACGACGGCAAGATTGCAGATGTTTGGTCTTG
TGGGGTGACGTTGTATGTGATGTTAGTCGGGGCTTATCCTTTTGAAGACC
CAGAGGATCCAAGAAACTTCAAAAAGACAATTCAGCGGATTCTGAGTGTC
CACTACTCAATACCAGGTTATGTCAGAGTTTCA
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