CX291686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_DICDI (Eukaryotic translation initiation factor 1A OS=Dictyostelium discoideum GN=eif1a PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.775e-37 Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = -3 Query: 181 DEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDD 498 ++KREL FKE+GQEYAQVLRMLGNGR EA C DG KRLCHI G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPET R+NE A V+D Sbjct: 20 EQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARINETDAFDDVED 125
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_YEAST (Eukaryotic translation initiation factor 1A OS=Saccharomyces cerevisiae GN=TIF11 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.019e-33 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -3 Query: 175 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 492 KRELI+KE+GQEYAQ+ +MLGNGR EA C DG KR+ HIRGK+ KKVW+G GDIILV LRD+QDD+ DV+ KY DEAR LK GELPE ++NE G D++ Sbjct: 23 KRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINETDNFGFESDED 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SCHPO (Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces pombe GN=tif11 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 2.966e-33 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 175 DEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 498 +EKREL + E+GQ YAQV +MLGNGR EA C DG KRL HIRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPET ++NE G +D+ Sbjct: 21 NEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKINETDTFGAEGEDD 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_HALMA (Translation initiation factor 1A OS=Haloarcula marismortui GN=eif1a PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = -3 Query: 226 DEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 498 D ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV D+QD+KAD+ +Y +A L+ G + E Sbjct: 5 DSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_METKA (Translation initiation factor 1A OS=Methanopyrus kandleri GN=eIF1A PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = -3 Query: 193 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE-TTRLNEGIAAG 489 +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI GD++LV ++Q ++ADV +Y + LK G+L E T+L E I G Sbjct: 11 KKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDERVTKLLEEIIPG 110
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIY (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIN (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIM (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIL (Translation initiation factor 1A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIK (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92 The following BLAST results are available for this feature:
BLAST of CX291686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291686 ID=CX291686; Name=CX291686; organism=Citrus clementina; type=EST; length=500bpback to top |