CX291686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULIA (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_HALS3 (Translation initiation factor 1A OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = -3 Query: 232 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 492 ++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A1_HALSA (Translation initiation factor 1A 1 OS=Halobacterium salinarium GN=eIF1A1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = -3 Query: 232 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 492 ++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULSO (Translation initiation factor 1A OS=Sulfolobus solfataricus GN=eIF1A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 250 RELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 489 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_NATPD (Translation initiation factor 1A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.770e-12 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 223 KRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPET 492 ++ L E + +A V MLG R + C+DG +R I G+M K++WI D++LV D+QD+KADV+ +Y EA L+ G + ++ Sbjct: 7 RKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDS 96
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_PICTO (Translation initiation factor 1A OS=Picrophilus torridus GN=eif1a PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = -3 Query: 226 KEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 474 K+ G+ Y V +M G R MC DG R C I GKM K++WI GD+++V ++QD+K D+I +Y +A L LPE Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEKGDIIYRYTKTQAAYLSRNHMLPE 99
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_METLZ (Translation initiation factor 1A OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eIF1A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.168e-11 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = -3 Query: 241 QEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAY 462 +++AQ MLG+ C DG RL I+GK+ K+VWI GDI++V D+QDDK D+I +Y + L+A+ Sbjct: 29 EQFAQAELMLGSNHIRVRCSDGVTRLGRIKGKIKKRVWIREGDILIVVPWDFQDDKCDIIYRYTTPQVDWLRAH 102
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_DESK1 (Translation initiation factor 1A OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = -3 Query: 226 EDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 471 ++G V+R LG A C+DG R I GK+ +KVWI GDIILVGL D+ +K +V+ KY +E L G +P+ Sbjct: 25 DEGTIICGVVRHLGGDYLIAKCLDGVDRKIRIPGKLRRKVWITEGDIILVGLWDFSSEKGEVVYKYGKNEVNKLVEKGVVPK 106
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_SULTO (Translation initiation factor 1A OS=Sulfolobus tokodaii GN=eIF1A PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = -3 Query: 247 DGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLK 468 +G+ V +MLG + +C+DG +RL I GKM KK+W+ GD++L D+Q +K D+I KY E R L+ Sbjct: 20 EGEVICVVKKMLGAEHVQVICLDGKERLGRIPGKMKKKMWVKEGDVVLAAPWDFQPNKCDIIYKYSESEVRRLE 93
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_METS5 (Translation initiation factor 1A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF1A PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = -3 Query: 250 EDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLL 471 E+G+ V +MLG C+DG +R I G+M KK WI GD++L D+Q KAD++ +YM DE R L Sbjct: 19 EEGEVICVVKKMLGAEHIIIACLDGKERTARIPGRMRKKTWIKEGDVVLAAPWDFQPTKADIVYRYMNDEIRKL 92 The following BLAST results are available for this feature:
BLAST of CX291686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291686 ID=CX291686; Name=CX291686; organism=Citrus clementina; type=EST; length=500bpback to top |