CX291689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291689 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.241e-12 Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 170 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRIQSHAVLA 325 RYRPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++ +R QS+AVLA Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLA 115
BLAST of CX291689 vs. ExPASy Swiss-Prot
Match: HCP3L_CAEEL (Histone H3-like centromeric protein cpar-1 OS=Caenorhabditis elegans GN=cpar-1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.568e-11 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 155 VKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRIQSHAVLA 325 + K RYRPG AL EIRKYQ+S +LLI K PF RLVREI Q F +DLRI+S A+ A Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINA 217
BLAST of CX291689 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.568e-11 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 170 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD----FKTD--LRIQSHAV 319 RYRPGT ALREIRKYQ+ST+LLI++LPF R+VREI+ + F TD LR QS A+ Sbjct: 21 RYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTAL 76
BLAST of CX291689 vs. ExPASy Swiss-Prot
Match: H3_LITVA (Histone H3 (Fragments) OS=Litopenaeus vannamei PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.884e-11 Identity = 37/47 (78.72%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 161 KPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 301 KPHRYRPGTVALR STELLIRKLPFQ REIAQDFKTDLR Sbjct: 1 KPHRYRPGTVALR-------STELLIRKLPFQ---REIAQDFKTDLR 37 The following BLAST results are available for this feature:
BLAST of CX291689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291689 ID=CX291689; Name=CX291689; organism=Citrus clementina; type=EST; length=326bpback to top |