CX291690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.238e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3 Query: 117 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 75.485 bits (184), Expect = 1.858e-13 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 3 Query: 3 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 116 DQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 39 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.982e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3 Query: 117 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 3 Query: 3 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 116 DQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 39 DQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 3 Query: 117 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGD 347 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG+ Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGGN 77 HSP 2 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 3 Query: 3 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 116 DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 39 DQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 3 Query: 117 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 3 Query: 3 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 116 DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 39 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 5.037e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3 Query: 150 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 338 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 3 Query: 3 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 110 DQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 28 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21 Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 117 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGD 347 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGGD Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGD 77
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20 Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 123 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 123 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 123 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX291690 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 123 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 344 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of CX291690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291690 ID=CX291690; Name=CX291690; organism=Citrus clementina; type=EST; length=545bpback to top |