CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.125e-66
Identity = 118/150 (78.67%), Postives = 127/150 (84.67%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQNLFM 458
            GCV+AELLLGQPLFPGE GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+P EAVDLV R  QYSPNLRC AL+   HPFFDELRDPN RLP GR LPPLFNFKP    EL G+P ET+ +L+PEHARKQ  F+
Sbjct:  263 GCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPFFDELRDPNARLPTGRFLPPLFNFKP---HELKGVPVETLMKLVPEHARKQCPFL 409          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 1.970e-64
Identity = 109/147 (74.15%), Postives = 127/147 (86.39%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            AGCV+AELLLGQPLFPGE+ VDQLVEIIKVLGTPTREEI+CMNP+YT+F+FPQIK HPWHK+F KR+PPEA+D   R  QYSP+LRCTALEAC HPFFDELR+PN RLPNGRP PPLFNFK     E++G  PE +N+LIP+H ++Q
Sbjct:  227 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPHYTDFRFPQIKAHPWHKIFHKRMPPEAIDFASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFK----QEVAGSSPELVNKLIPDHIKRQ 369          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 1.277e-63
Identity = 113/144 (78.47%), Postives = 121/144 (84.03%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            GCVMAELLLGQPLFPGESG+DQLVEIIK+LGTPTREEI+CMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLRCTALEAC HPFFD+LRDPN  LPNGR LPPLFNF      EL+G   E   RLIP H +
Sbjct:  326 GCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNVSLPNGRALPPLFNF---TAQELAGASTELRQRLIPAHCQ 466          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.081e-62
Identity = 112/144 (77.78%), Postives = 120/144 (83.33%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            GCVMAELLLGQPLFPGESG+DQLVEIIK+LGTPTREEI+CMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLRCTALEAC HPFFD+LR PN  LPNGR LPPLFNF      EL+G   E   RLIP H +
Sbjct:  322 GCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPPLFNF---TAQELAGASTELRQRLIPAHCQ 462          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 7.505e-56
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARK 443
            GCVMAEL LG PLFPGE+ VDQLVEIIK+LGTP REEIK MNP Y +FKFPQIK  PWHK+F++++ PEA+DL  R  QYSPNLRCTALEAC HPFFD+LRDP   LPNGR LPPLF+F      EL+G   E  +RLIPEHARK
Sbjct:  290 GCVMAELFLGHPLFPGETSVDQLVEIIKILGTPAREEIKNMNPRYNDFKFPQIKAQPWHKIFRRQVSPEAMDLASRLLQYSPNLRCTALEACAHPFFDDLRDPRASLPNGRALPPLFDF---TAQELAGASVELRHRLIPEHARK 431          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.260e-52
Identity = 102/147 (69.39%), Postives = 114/147 (77.55%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ++S  S  P  TI  LIP HAR Q
Sbjct:  243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELS--SNPPLATI--LIPPHARIQ 385          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.260e-52
Identity = 102/147 (69.39%), Postives = 114/147 (77.55%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ++S  S  P  TI  LIP HAR Q
Sbjct:  243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELS--SNPPLATI--LIPPHARIQ 385          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.260e-52
Identity = 102/147 (69.39%), Postives = 114/147 (77.55%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ++S  S  P  TI  LIP HAR Q
Sbjct:  243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELS--SNPPLATI--LIPPHARIQ 385          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.260e-52
Identity = 102/147 (69.39%), Postives = 114/147 (77.55%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ++S  S  P  TI  LIP HAR Q
Sbjct:  243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELS--SNPPLATI--LIPPHARIQ 385          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.565e-51
Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L     +Y+P+ R + LEAC H FFDELR   T+LPN RPLPPLFNF P ++S    I P     LIP H R
Sbjct:  306 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRSLGTQLPNNRPLPPLFNFSPGELS----IQPSLNAILIPPHLR 446          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MSK1_MEDSA6.125e-6678.67Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
KSG7_ARATH1.970e-6474.15Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG8_ARATH1.277e-6378.47Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA1.081e-6277.78Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG2_ARATH7.505e-5670.34Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
GSK3B_SPECI2.260e-5269.39Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
GSK3B_RAT2.260e-5269.39Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE2.260e-5269.39Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN2.260e-5269.39Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
GSK3A_RAT5.565e-5166.90Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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