CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+  E+  G+PLFPG +  D+L  I ++LGTP++E    ++ N  +  + FP+ KP P       RL  E ++L+ +F QY    R  A EA  H +F  L
Sbjct:  376 GCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLIN-HAPRLDSEGIELITKFLQYESKKRVPAEEAMKHVYFRSL 476          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK15_RAT (Mitogen-activated protein kinase 15 OS=Rattus norvegicus GN=Mapk15 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 35/113 (30.97%), Postives = 58/113 (51.33%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHP---WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG 338
            GC++ E+L GQPLFPG S   QL  I++ +  P+ EE++ +  +Y+      +   P      +     PPEA+DL+ R   ++P+ R +A +A  HP+      P+     G
Sbjct:  206 GCILGEMLRGQPLFPGTSTFHQLELILETIPLPSMEELQGLGSDYSALILQNLGSRPRQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHPYVQRFHCPDREWTRG 318          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK12_RAT (Mitogen-activated protein kinase 12 OS=Rattus norvegicus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN----PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 314
            GC+MAE++ G+ LF G   +DQL EI+KV GTP  E ++ +      NY E   P+++   +  V      P+AV+L+ +        R TA EA  HP+F+ LRD
Sbjct:  213 GCIMAEMITGKILFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAEAKNYME-GLPELEKKDFASVL-TNASPQAVNLLEKMLVLDAEQRVTAAEALAHPYFESLRD 316          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_CANGA (Mitogen-activated protein kinase HOG1 OS=Candida glabrata GN=HOG1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE++ G+PLFPG+  V Q   I  +LG+P  + I  + + N  +F    P   P P+ + F K + P+AVDL+ +   + P  R TA +A  HP+     DP
Sbjct:  203 AGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPSDVIDTICSENTLKFVTSLPHRDPIPFSERF-KTVEPDAVDLLEKMLVFDPKKRITAADALAHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CPK1_CRYNE (Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans GN=CPK1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE--FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 359
            GC++AE++ G+PLFPG     QL  I++VLGTPT ++   +    ++   +  +            +  P AVDL+ +   +SP+ R T  EA +H + +   DP+   PN  PL P F
Sbjct:  211 GCILAEMINGKPLFPGRDYHHQLSLILQVLGTPTMDDFNEITSQRSKDYLRALEFTRRQDFSAICPKAKPAAVDLLKQTLTFSPSKRITVEEALMHSYVEAYHDPHDE-PNAEPLKPGF 328          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+ AEL   QPLF G+S V QL+ I K+LGTP  +    ++  PN+ E  +PQ  P     +    L  +A+DL+ +  QY P+ R +A +A  HP+F+++
Sbjct:  223 GCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHE--YPQWNPSKVSDLVH-GLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDV 321          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 35/100 (35.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+ AE++  Q LFPG+S   QL+ I ++LGTPT ++   +        +P+ +P    +     L PE +DL+ +  +Y+P  R +A  A  HP+FD L
Sbjct:  208 GCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSRAVPS-LSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 306          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKD3_ARATH (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 3
Query:   12 CVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGI--PPETINRLIPEHARKQNL 452
            C+ AELLL +P   G S +DQL +I    GTP  ++   +   P+Y E++F    P P  +     +  +A+DL+ + F Y P  R +  +A  H +F     P       +P+P           E   +  PP  + R++PE  R  +L
Sbjct:  198 CIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYVEYQF---VPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDPAKLPKPVPKQDGKSSYGKHEAITVQSPPRKLRRVMPERGRVDSL 345          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 299
            GC+ AE++ G+ LFPG+S +DQL  I + LGTP+      ++  P+Y +  FP+       ++    L PE  DL+ R  QY P+ R +A  A  HP+F
Sbjct:  189 GCIFAEMVTGKALFPGDSEIDQLFRIFRTLGTPSEATWPGVSQMPDY-QSSFPKWSRKGLEEIVPS-LGPEGKDLLLRLLQYDPSQRISAKTALAHPYF 285          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 314
            GC+ AE+   +PLFPG+S +D++  I ++LGTP  E    +N  P++ +  FPQ K  P  +     L    +DL+ +   Y P+ R +A  A +HP+F++  D
Sbjct:  196 GCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYLPDF-KSSFPQWKKKPLSEAVPS-LDANGIDLLDQMLVYDPSRRISAKRALIHPYFNDNDD 297          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
CDK17_MOUSE3.301e-1136.27Cell division protein kinase 17 OS=Mus musculus GN... [more]
MK15_RAT4.311e-1130.97Mitogen-activated protein kinase 15 OS=Rattus norv... [more]
MK12_RAT4.311e-1137.74Mitogen-activated protein kinase 12 OS=Rattus norv... [more]
HOG1_CANGA4.311e-1136.45Mitogen-activated protein kinase HOG1 OS=Candida g... [more]
CPK1_CRYNE4.311e-1132.77Mitogen-activated protein kinase CPK1 OS=Cryptococ... [more]
CKB21_ORYSJ4.311e-1138.24Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CKB12_ARATH4.311e-1135.00Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDKD3_ARATH4.311e-1128.48Cyclin-dependent kinase D-3 OS=Arabidopsis thalian... [more]
CDK3_MOUSE5.630e-1137.37Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDC28_CANAL5.630e-1134.62Cell division control protein 28 OS=Candida albica... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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