CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE+L G+PLFPG+  V+Q   I ++LGTP  + I  + + N   F    P+ +  P    F K   P A+DL+ R   + P  R TA EA  H +     DP
Sbjct:  200 AGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLKNKF-KNADPSAIDLLERMLVFDPKKRITATEALAHEYLTPYHDP 305          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP-QIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            AGC+ AE+  G+PLFPG S  DQL++I +++GTP       ++ +Y  FK   QI      ++    L    ++L+    Q  P+ R TA +A  HP+F E+ +PN
Sbjct:  193 AGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNERTWPGVS-SYANFKNNWQIFVPQDLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWFHEISNPN 297          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL 347
            GC+ A++L  +P+FPG   ++QL  II +LG+   E+I+ ++ N    K+ +  P+     F +  P   P A+DL+ R   + P+ R + +EA  HP+   L DPNT  P   P+
Sbjct:  221 GCIFADVLGRKPVFPGTECLNQLKLIINILGSQREEDIEFID-NPKARKYIKSLPYSPGTPFSRLYPNAHPLAIDLLQRMLVFDPSKRISVMEALQHPYMSPLYDPNTDPPAQVPI 335          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_WALSE (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia sebi GN=HOG1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            GC+ AE++ G+P+FPG+  V QL  I ++LG+P  + I  +    T  +F    P      FQ+R P    E +DL+ +   ++P  R TA +A  HP+     DP+
Sbjct:  136 GCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVINTITSENTR-RFVDALPKREKIPFQQRFPNASEEEIDLLEKMLDFNPKERITAADAIQHPYLAPYHDPS 241          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_WALMU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia muriae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            GC+ AE++ G+P+FPG+  V QL  I ++LG+P  + I  +    T  +F    P      FQ+R P    E +DL+ +   ++P  R TA +A  HP+     DP+
Sbjct:  136 GCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVINTITSENTR-RFVDALPKREKIPFQQRFPNANEEEIDLLEKMLDFNPKERITAADAIQHPYLAPYHDPS 241          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: ERK1_DICDI (Extracellular signal-regulated kinase 1 OS=Dictyostelium discoideum GN=erkA PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            GC+ AELL  +PLF G+  + Q+  II+ +G+P+ E+I C   N    +F +   +     F    P   P+A+DL+ R   + P+ R T  EA  HP+F  L DP+
Sbjct:  339 GCIFAELLGRKPLFQGKDYIHQITLIIETIGSPSEEDI-CNIANEQARQFIRNMGNQPKVNFANMFPKANPDAIDLLERMLYFDPSKRLTVEEALAHPYFQSLHDPS 444          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKF3_ORYSJ (Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE-IKCMN-PNYTEFKFPQIKP-HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD-------ELRDPNTRLPNGRPLPPL------FNFKPPD------MSELSGIPPETINRLIPEHARKQNL 452
            G ++AEL    PLFPG S  DQL +I  VLGTP      + MN P  + F F QI P + W  +    L  EA+DL+ +   + P  R TA ++  HPFF+        L   +T+    RP P L      F  +P D      +S     P    +  +PEH +++ L
Sbjct:  186 GAILAELFTLSPLFPGGSETDQLYKICAVLGTPDHTVWPEGMNLPRSSSFNFFQIPPRNLWELIPNATL--EAIDLIQQLCSWDPRRRPTAEQSLQHPFFNVGNWVPRPLHASHTKTIETRPNPRLELNLWDFGTEPEDNYLDLTLSLKPSFPGTDFSNNVPEHTKEEIL 353          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+ AE++  +PLFPG+S +D+L +I +VLGTP  +    ++  P+Y +  FP+ +      +    L P  +DL+ +  +Y PN R TA +A  H +F +L
Sbjct:  191 GCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDY-KSAFPKWQAQDLATIV-PTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDL 290          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            GC+ AE++ G PLFPG S  DQL  I K+LGTP+ +       +   NP+++ +     +   W  +  K L    +DL+ R  Q  P  R +A EA  H +F +L  P
Sbjct:  188 GCIFAEMINGVPLFPGISEQDQLKRIFKILGTPSVDSWPQVVNLPAYNPDFSYY-----EKQSWSSIVPK-LNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHRP 290          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
HOG1_MAGGR7.353e-1137.38Mitogen-activated protein kinase HOG1 OS=Magnaport... [more]
PHO85_DEBHA9.604e-1135.85Negative regulator of the PHO system OS=Debaryomyc... [more]
MAPK_PETHY9.604e-1133.62Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
HOG1_WALSE9.604e-1133.64Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_WALMU9.604e-1133.64Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
ERK1_DICDI9.604e-1135.51Extracellular signal-regulated kinase 1 OS=Dictyos... [more]
CDKF3_ORYSJ9.604e-1132.94Cyclin-dependent kinase F-3 OS=Oryza sativa subsp.... [more]
CDKA1_ORYSJ9.604e-1135.29Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2H_THEPA9.604e-1134.86Cell division control protein 2 homolog OS=Theiler... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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