CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.050e-49
Identity = 96/145 (66.21%), Postives = 110/145 (75.86%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L     +Y+P+ R + LEAC H FFDELR   T+LPN RPLPPLFNF   ++S    I P     LIP H R
Sbjct:  306 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLPPLFNFSAGELS----IQPSLNAILIPPHLR 446          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: SGG_DROME (Protein kinase shaggy OS=Drosophila melanogaster GN=sgg PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.790e-49
Identity = 93/144 (64.58%), Postives = 114/144 (79.17%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR-DPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEH 434
            AGCV+AELLLGQP+FPG+SGVDQLVE+IKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R P EA++LV    +Y+P+ R T L+AC HPFFDELR + N  LPNGR +PPLFNF   ++S    I P  + +L+P+H
Sbjct:  794 AGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNGRDMPPLFNFTEHELS----IQPSLVPQLLPKH 933          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.585e-48
Identity = 95/146 (65.07%), Postives = 110/146 (75.34%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ-KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            AGCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+  + PPEA+ L     +Y+P+ R + LEAC H FFDELR    +LPN RPLPPLFNF P ++S    I P     LIP H R
Sbjct:  306 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSSKTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRRLGAQLPNDRPLPPLFNFSPGELS----IQPSLNAILIPPHLR 447          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.858e-47
Identity = 89/147 (60.54%), Postives = 111/147 (75.51%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ-KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARKQ 446
            GCV+AELLLGQPLFPGE+G+DQLVEIIKVLGTPT+E+I  MNP YT FKFP+IK +PW +VF+ K +P E++DL+ +   Y P+ R   +E C HPFFDELRDP T LP+G+PLPPLFNF    ++E + I P+    LIP HA  Q
Sbjct:  242 GCVLAELLLGQPLFPGENGIDQLVEIIKVLGTPTKEQIHAMNPYYTSFKFPEIKANPWPRVFKAKDVPAESIDLISKILLYDPSSRLKPVEICAHPFFDELRDPKTCLPDGKPLPPLFNF---TIAEQTSIGPKLAKTLIPSHAMNQ 385          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 3.494e-45
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG-------RPLPPLFNFKPPDMSELSGIPPETINRLIPEHAR 440
            GCVMAEL+LG PLFPGESG+DQLVEIIK+LGTP+RE+IK MNPNY E +FPQI+P P  +VF + +P +A+DL+ +  QY+P  R TA EA  HPFFDELRDPNT+L N        R LP LFNF P ++S    I P+   +LIP HAR
Sbjct:  220 GCVMAELMLGHPLFPGESGIDQLVEIIKILGTPSREQIKTMNPNYMEHRFPQIRPQPLSRVFSRSVPLDALDLLSKMLQYTPTDRLTAAEAMCHPFFDELRDPNTKLHNSRNPDASPRHLPELFNFSPFELS----IRPDLNQKLIPSHAR 366          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.017e-44
Identity = 85/142 (59.86%), Postives = 108/142 (76.06%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR-DPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIP 428
            AGCVM+ELLLGQ +FPG+SGVDQ+VEI+KV+GTPT E++  MNP+Y +FK P++KPHPW KVF+ R P EA+DLV +   YSPN R + L  C HPFFDELR DP+ +LPNGR LPPLFNF   + +    I P+T+  L+P
Sbjct:  220 AGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSEQLHDMNPHYKQFKLPELKPHPWSKVFRIRTPAEAIDLVSKMLIYSPNARVSPLMGCAHPFFDELRQDPHQQLPNGRSLPPLFNFTDYEKT----IEPDTMPLLLP 357          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.265e-44
Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELS 392
            AG VMAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNY EFKFPQIK HPW+KVF+   P EA+DL+ +  +Y+P  R T   AC H FFDELR+P+ RLP+GRPLP L    P    E+S
Sbjct:  223 AGTVMAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRNPDARLPSGRPLPTLEMDGPMGTGEVS 351          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.270e-43
Identity = 83/130 (63.85%), Postives = 99/130 (76.15%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSG 395
            AG V+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNY EFKFPQIK HPW+KVF+   P EA+DL+ +  +Y+P  R T   AC H FFDELR P+ RLP+GR LP L    P ++S   G
Sbjct:  223 AGTVIAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRSPDARLPSGRALPQLEMDGPNEVSATGG 352          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.091e-30
Identity = 70/150 (46.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP-------LPPLFNFKPPDMSELSGIPPETINRLIPEH 434
            A CV+AEL +G+PLFPG+S V+QLVEII+VLGTP+  EI  MNPNY     P ++PH    V        A+DL+ +   Y P+ R +A+E   HPFFDELRDPN      R        LPPLFNF   +++ELS I P     ++P H
Sbjct:  212 AACVIAELFIGRPLFPGDSSVEQLVEIIRVLGTPSYHEISVMNPNYVNHSLPNVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKRISAIEVLTHPFFDELRDPNCMYHCSRDEGTIERHLPPLFNF---NLAELS-IRPNLNKAILPPH 357          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.881e-28
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 311
            +GCVMAELLLGQP+FPGESG+DQLVEIIK+LGTP+++EI  MNPNY E KFPQIKP P  +VF+K    + V+ +    +Y P  R  AL+    P+FDEL+
Sbjct:  226 SGCVMAELLLGQPMFPGESGIDQLVEIIKILGTPSKQEICSMNPNYMEHKFPQIKPIPLSRVFKKE-DDQTVEFLADVLKYDPLERFNALQCLCSPYFDELK 326          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
GSK3A_HUMAN1.050e-4966.21Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
SGG_DROME1.790e-4964.58Protein kinase shaggy OS=Drosophila melanogaster G... [more]
GSK3A_MOUSE2.585e-4865.07Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3_DICDI2.858e-4760.54Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
GSK3_SCHPO3.494e-4559.60Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
GSK3H_DROME1.017e-4459.86Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
GSK3_CAEEL2.265e-4465.89Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
GSK3_CAEBR3.270e-4363.85Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK31_SCHPO1.091e-3046.67Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
MDS1_YEAST3.881e-2858.82Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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