CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 323
            + CV+AELLLG+PLF GESG+DQLVEIIK++G PT++EI  MNPNY +  FP IKP    ++F K   P+ +DL+ +  +Y P  R   L+  +  +FDE +  +T
Sbjct:  351 SACVIAELLLGKPLFSGESGIDQLVEIIKIMGIPTKDEISGMNPNYEDHVFPNIKPITLAEIF-KAEDPDTLDLLTKTLKYHPCERLVPLQCLLSSYFDETKRCDT 455          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 80.8777 bits (198), Expect = 4.921e-15
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLI-PEHARKQ 446
            GC++AE+L  +P+FPG+  +DQL  I+ +LG+P++E++ C+      NY +   P      W K+F K    +A+DL+ R   ++PN R T  EA  HP+ ++  DP        P    F F   DM EL  +P E +  LI  E AR Q
Sbjct:  233 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEP----FTF---DM-ELDDLPKERLKELIFQETARFQ 373          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 80.8777 bits (198), Expect = 4.921e-15
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLI-PEHARKQ 446
            GC++AE+L  +P+FPG+  +DQL  I+ +LG+P++E++ C+      NY +   P      W K+F K    +A+DL+ R   ++PN R T  EA  HP+ ++  DP        P    F F   DM EL  +P E +  LI  E AR Q
Sbjct:  233 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEP----FTF---DM-ELDDLPKERLKELIFQETARFQ 373          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.427e-15
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 359
            GC++AEL L +P+FPG     QL+ I  ++GTP +  +++C+ +P   E+    P     P  K+F  R+ P+ +DL+ R   + P  R TA EA  HP+     DPN   P G P+PP F
Sbjct:  210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDE-PEGEPIPPSF 328          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 80.1073 bits (196), Expect = 8.394e-15
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLI-PEHARKQ 446
            GC++AE+L  +P+FPG+  +DQL  I+ +LG+P++E++ C+      NY +   P      W K+F K    +A+DL+ R   ++PN R T  EA  HP+ ++  DP        P    F F      EL  +P E +  LI  E AR Q
Sbjct:  232 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEP----FTF----AMELDDLPKERLKELIFQETARFQ 372          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14
Identity = 46/149 (30.87%), Postives = 79/149 (53.02%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIPEHARK 443
            GC++AE+L  +P+FPG+  +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F     P+A+DL+ +   ++P+ R     A  HP+ ++  DP+       P    F F+     EL  +P ET+  LI E   +
Sbjct:  218 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQYYDPSDEPVAEAP----FKFE----MELDDLPKETLKELIFEETAR 356          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK20_MOUSE (Cell division protein kinase 20 OS=Mus musculus GN=Cdk20 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF---------DEL---RDPNTRLPNGRPLPP-LFNFKPPDMSELSGIPPETINRLIPE 431
            GC+M ELL G PLFPGE+ ++QL  ++++LGTP+     EI  + P+Y +  F +  P P  +V      P+A+DL+ +F  Y P  R  A +A +H +F          EL   + P    P   P PP + +F      E S + PE I   IPE
Sbjct:  191 GCIMGELLNGSPLFPGENDIEQLCCVLRILGTPSPRVWPEITEL-PDYNKISFKEQAPVPLEEVLPD-ASPQALDLLGQFLLYPPRQRIAASQALLHQYFFTAPLPAHPSELPIPQRPGGPAPKAHPGPPHVHDFHVDRPLEESLLNPELIRPFIPE 345          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+ AE++  Q LFPG+S + QL+ I ++LGTPT E+   +       +FPQ KP    ++ ++++P   PE VDL+ +  QY+P  R +A  A  HP+FD L
Sbjct:  200 GCIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHEFPQWKP----QILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSL 298          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 305
            GC+ AE++ G+PLFPG S  DQL+ I K+LGTP  +      ++   +PN     FP  +P PW + F K L    +DL+ +  +  PN R TA +A  HP+F E
Sbjct:  188 GCIFAEMVNGRPLFPGVSDTDQLMRIFKILGTPNSQNWPDVFKLPKYDPN-----FPVYEPLPW-ETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 305
            GC+ AE++ G+PLFPG S  DQL+ I K+LGTP  +      ++   +PN     FP  +P PW + F K L    +DL+ +  +  PN R TA +A  HP+F E
Sbjct:  189 GCIFAEMVNGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKLPKYDPN-----FPVYEPLPW-ETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 287          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MRK1_YEAST7.089e-2248.11Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]
MK03_RAT4.921e-1535.76Mitogen-activated protein kinase 3 OS=Rattus norve... [more]
MK03_MOUSE4.921e-1535.76Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
FUS3_YEAST6.427e-1537.19Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
MK03_HUMAN8.394e-1534.44Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
MK01_XENLA1.096e-1430.87Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
CDK20_MOUSE1.870e-1435.03Cell division protein kinase 20 OS=Mus musculus GN... [more]
CKB11_ORYSJ2.442e-1439.81Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CDC2H_PLACH2.442e-1440.00Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAYO3.190e-1440.00Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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