CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK13_HUMAN (Mitogen-activated protein kinase 13 OS=Homo sapiens GN=MAPK13 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 344
            GC+MAE+L G+ LF G+  +DQL +I+KV G P  E ++ +N    +  + Q  P    K F +  P   P+A DL+ +  +   + R TA +A  HPFF+  RDP       +P
Sbjct:  210 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQP 323          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK20_HUMAN (Cell division protein kinase 20 OS=Homo sapiens GN=CDK20 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 51/156 (32.69%), Postives = 78/156 (50.00%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF---------DELRDPNT---RLPNGRPLPP-LFNFKPPDMSELSGIPPETINRLIPE 431
            GC+M ELL G PLFPG++ ++QL  ++++LGTP  +    +   P+Y +  F +  P P  +V    + P+A+DL+ +F  Y P+ R  A +A +H +F          EL  P       P   P PP + +F      E S + PE I   I E
Sbjct:  191 GCIMGELLNGSPLFPGKNDIEQLCYVLRILGTPNPQVWPELTELPDYNKISFKEQVPMPLEEVLPD-VSPQALDLLGQFLLYPPHQRIAASKALLHQYFFTAPLPAHPSELPIPQRLGGPAPKAHPGPPHIHDFHVDRPLEESLLNPELIRPFILE 345          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 305
            GC+ AE++ G PLFPG S  DQL+ I ++LGTP  +      E+   +PN+T +     +P PW   F K L    +DL+ +  +  PN R TA +A  H +F E
Sbjct:  188 GCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 305
            GC+ AE++ G PLFPG S  DQL+ I ++LGTP  +      E+   +PN+T +     +P PW   F K L    +DL+ +  +  PN R TA +A  H +F E
Sbjct:  188 GCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK13_PANTR (Mitogen-activated protein kinase 13 OS=Pan troglodytes GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 344
            GC+MAE+L G+ LF G+  +DQL +I+KV G P  E ++ +N    +  + Q  P    K F +  P   P+A DL+ +  +   + R TA +A  HPFF+  RDP       +P
Sbjct:  210 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDXAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQP 323          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: GLKA_DICDI (Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT-EFKFPQIKP---HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            GC++AE+L+G+PLFPG +  DQL  II+VLG+PT+++++ M P+     + P I P      H V  K +    VDL+ + F + P  R +  E   HPF   LRD N
Sbjct:  270 GCILAEMLIGKPLFPGTNSNDQLGRIIEVLGSPTKDDMEAMKPSKPYHLQLPNINPKFFESLHNVEDKTV----VDLLSKIFIFDPVKRASIDEIIAHPF---LRDVN 370          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.857e-13
Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQK--RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 314
            GC+  EL+  +PLFPG   V QL  +++++GTP+ EE++ +N N   +   Q+ P+P   +  K   + P A+DL+ +   + P  R T L+A  HP+ + L D
Sbjct:  251 GCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEEELEFLNENAKRY-IRQLPPYPRQSITDKFPTVHPLAIDLIEKMLTFDPRRRITVLDALAHPYLNSLHD 353          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.857e-13
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            GC+MAE+LLG+PLF G   +DQL+EI+KV GTP++E   +++  +      K P+ +     ++    + P+A+ ++       P  R TA EA   PFF E R+P
Sbjct:  211 GCIMAEMLLGKPLFKGHDHLDQLMEIMKVTGTPSKEFTAKLQSEDARNYVTKLPRFRKKDL-RILLPNVNPQAIKVLDGMLLLDPESRITAAEALAFPFFSEFREP 315          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK20_PONAB (Cell division protein kinase 20 OS=Pongo abelii GN=CDK20 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.026e-12
Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP 374
            GC+M ELL G PLFPG++ ++QL  ++++LGTP  +    +   P+Y +  F +  P P  +V      P+A+DL+ +F  Y P  R  A +A +H +F     P    P+  P+P       P
Sbjct:  191 GCIMGELLNGSPLFPGKNDIEQLCYVLRILGTPNPQVWPELTELPDYNKISFKEQAPVPLEEVLPD-ASPQALDLLGQFLLYPPRQRIAASKALLHQYF--FTAPLPAHPSELPIPQRLGVPAP 311          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.026e-12
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 302
            A C+MAE++L +P FPG+S +DQL  I KVLGTP       +   PNY + +FP   P     +F  R  P+ VDL+ +  +Y P +R TA     H +F+
Sbjct:  192 AACIMAEVVLMRPFFPGDSEIDQLFRIFKVLGTPNNSRWSNVENFPNY-KVEFPVWDPVDLKTIF--RGDPDFVDLISKMLEYDPKMRMTAKNGLSHKYFE 289          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MK13_HUMAN4.606e-1335.65Mitogen-activated protein kinase 13 OS=Homo sapien... [more]
CDK20_HUMAN4.606e-1332.69Cell division protein kinase 20 OS=Homo sapiens GN... [more]
CDC2H_PLAFK4.606e-1338.10Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF74.606e-1338.10Cell division control protein 2 homolog OS=Plasmod... [more]
MK13_PANTR6.016e-1335.65Mitogen-activated protein kinase 13 OS=Pan troglod... [more]
GLKA_DICDI6.016e-1339.81Probable serine/threonine-protein kinase glkA OS=D... [more]
MPK6_ARATH7.857e-1334.62Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MK12_DANRE7.857e-1336.79Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
CDK20_PONAB1.026e-1233.06Cell division protein kinase 20 OS=Pongo abelii GN... [more]
CDC28_ENCCU1.026e-1239.60Probable cell division control protein 28 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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