CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK13_RAT (Mitogen-activated protein kinase 13 OS=Rattus norvegicus GN=Mapk13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 344
            GC+MAE+L G+ LF G+  +DQL +I+KV G P  E ++ +     +  + Q  P    K F +  P   P+AVDL+ +  +   + R TA +A  HP F+ LRDP       +P
Sbjct:  210 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAK-SYIQSLPQSPKKDFTQLFPRASPQAVDLLDKMLELDVDKRLTAAQALAHPLFEPLRDPEEETEAQQP 323          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ +E++ G+PLFPG+  V Q   I  +LG+P R+ I  +    T  KF    PH     FQ+R   + P+AVDL+ R   + P  R TA +A VHP+     DP
Sbjct:  203 AGCIFSEMIEGKPLFPGKDHVHQFSIITDLLGSPPRDVINTICSENT-LKFVTSLPHRDPVPFQERFKTVEPDAVDLLERMLVFDPKKRITAADALVHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM--NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN--TRLPNGRPLPPLFNFKPPDMSELSG----IPPETINRLIPEHARKQNLFMA 461
            AGC+ AELLL +P   G S +DQL +I    GTP   +   M   P+Y E++F  +   P   +F      +A+DL+ R F Y P  R TA +A  H +F  +  P   ++LP   P     N K PD++   G     PP  + R+      + ++  A
Sbjct:  203 AGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVEYQF--VSAPPLRSLF-PMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLPRPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTAHEGMEVHMHRA 359          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM--NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN--TRLPNGRPLPPLFNFKPPDMSELSG----IPPETINRLIPEHARKQNLFMA 461
            AGC+ AELLL +P   G S +DQL +I    GTP   +   M   P+Y E++F  +   P   +F      +A+DL+ R F Y P  R TA +A  H +F  +  P   ++LP   P     N K PD++   G     PP  + R+      + ++  A
Sbjct:  203 AGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVEYQF--VSAPPLRSLF-PMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLPRPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTAHEGMEVHMHRA 359          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+  E+L  +PLF G+  +DQ+  I +VLGTP       +   P Y    FP     P++K+F  R  P A+DL+ +  QY P+ R +A EA +HP+F +L
Sbjct:  192 GCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVS-TFPNWPGQPYNKIF-PRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDL 291          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG2_ZYGRO (Mitogen-activated protein kinase HOG2 OS=Zygosaccharomyces rouxii GN=HOG2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.750e-12
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ +E++ G+PLFPG+  V Q   I  +LG+P R+ I  +    T  KF    PH     FQ+R   + P+AVDL+ R   + P  R TA +A VHP+     DP
Sbjct:  203 AGCIFSEMIEGKPLFPGKDHVHQFSIITDLLGSPPRDVINTICSENT-LKFVTSLPHRDPVPFQERFKTVEPDAVDLLRRMLVFVPKKRITAADALVHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.750e-12
Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPH-PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            GC++AE+L  +P+FPG+  +DQL  I+ VLG+P+R++++C+      NY E   P  KP+ PW K+F       A+DL+ +   ++P+ R    EA  HP+ ++  DP
Sbjct:  278 GCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE-SLP-FKPNVPWAKLF-PNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDP 382          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.286e-12
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 344
            GC+MAE+L G+ LF G+  +DQL +I+KV G P  E ++ +     +  + Q  P    K F +  P   P+A DL+ +  +   + R TA +A  HPFF+  RDP       +P
Sbjct:  210 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAK-SYIQSLPQSPKKDFTQLFPRASPQAADLLDKMLELDVDKRLTAAQALAHPFFEPFRDPEEETEAQQP 323          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.985e-12
Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 305
            GC+ AE++ G+PLFPG S  DQL+ I ++LGTP       +   P Y +  F   +P PW + F K L    +DL+ +  +  PN R TA EA  H +F E
Sbjct:  188 GCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSANWPSVTELPKY-DPDFIVYEPLPW-ETFLKGLDDTGIDLLSKMLRLDPNQRITAKEALQHAYFKE 286          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSE 386
            GC+MAELL G+ LFPG   ++QL +I+++ GTP    I  M  +         PQ+    + +VF     P+AVDL+ +      + R TA EA  HP+F +  DP+   P   P    F  +  D+ E
Sbjct:  211 GCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASLISRMPSHEARTYINSLPQMPKRNFSEVF-IGANPQAVDLLEKMLVLDTDKRITAAEALAHPYFAQYHDPDDE-PEAEPFDQSFESRELDIEE 337          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MK13_RAT1.340e-1235.65Mitogen-activated protein kinase 13 OS=Rattus norv... [more]
HOG1_ZYGRC1.340e-1239.25Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
CDKD1_ORYSJ1.340e-1231.88Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDKD1_ORYSI1.340e-1231.88Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDC2_DICDI1.340e-1238.24Cell division control protein 2 homolog OS=Dictyos... [more]
HOG2_ZYGRO1.750e-1239.25Mitogen-activated protein kinase HOG2 OS=Zygosacch... [more]
ERKA_DROME1.750e-1237.04Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
MK13_MOUSE2.286e-1234.78Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
CDC2H_PLAKH2.985e-1239.60Cell division control protein 2 homolog OS=Plasmod... [more]
MK14A_CYPCA3.899e-1234.11Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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