CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE--IKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK 368
            GC++AELLL  P  PG+S +DQL  I + LGTPT E+    C  P+Y  FK FP I   P H +F      + +DL+   F ++P  R TA +A    +F     P       RP  P+   K
Sbjct:  200 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI---PLHHIF-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLK 318          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRO (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ +E++ G+PLFPG+  V Q   I  +LG+P R+ I  +    T  KF    PH     FQ+R   + P+AVDL+ R   + P  R TA +A VHP+     DP
Sbjct:  203 AGCIFSEMIEGKPLFPGKVHVHQFSIITDLLGSPPRDVIITICSEDT-LKFVTSLPHRDPVPFQERFKAVEPDAVDLLGRMLVFDPKKRITAADALVHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_TORDE (Mitogen-activated protein kinase HOG1 OS=Torulaspora delbrueckii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE+  G+PLFPG+  V Q   I  +LG+P  + I  + + N  +F    P   P P+ + F K + PEAVDL+ +   + P  R TA +A VHP+     DP
Sbjct:  203 AGCIFAEMTEGKPLFPGKDHVHQFSIITDLLGSPPEDVINTICSENTLKFVTSLPHRDPVPFRERF-KTVEPEAVDLLEKMLVFDPKKRITAADALVHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE++ G+PLFPG+  V Q   I  +LG+P ++ I  + + N  +F    P   P P+   FQ  L P+A+DL+ +   + P  R TA +A  HP+     DP
Sbjct:  202 AGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPKDVIDTICSENTLKFVTSLPHRDPVPFSSRFQ-NLEPDAIDLLEKMLVFDPKKRITAADALAHPYLSPYHDP 307          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK14_XENLA (Mitogen-activated protein kinase 14 OS=Xenopus laevis GN=mapk14 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 46/144 (31.94%), Postives = 72/144 (50.00%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGIPPETINRLIP 428
            GC+MAELL G+ LFPG   +DQL  I++++GTP  E ++ ++     NY +   P +    +  VF     P+AVDL+ +      + R TA EA  H +F +  DP+   P   P    F  +  D+ E   +  E +   +P
Sbjct:  211 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPEPELLQKISSEAARNYIQ-SLPYMPKMNFEDVF-LGANPQAVDLLEKMLVLDTDKRITAAEALAHSYFAQYHDPDDE-PIAEPYDQSFESRELDIEEWKRLTYEEVTCFVP 351          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK14A_DANRE (Mitogen-activated protein kinase 14A OS=Danio rerio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE---FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSE 386
            GC+MAELL G+ LFPG   ++QL +I+++ GTP    I  M  +         PQ+    +  VF     P+AVDL+ +      + R TA EA  HP+F +  DP+   P   P    F  +  D+ E
Sbjct:  211 GCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPSSLISRMPSHEARTYISSLPQMPKRNFADVF-IGANPQAVDLLEKMLVLDTDKRITAAEALAHPYFAQYHDPDDE-PEAEPFDQSFESRELDIEE 337          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGV-DQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQK-RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK-PPDMSELS 392
            AGC+  E+  GQPLFPG S + +QL +I +VLG PT +    ++  PNY    FP  KP     V+ +    PEA DL  +  +  P  R +A EA VH +F  L     +LP+   L  +   K  P+M +LS
Sbjct:  284 AGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTEDTWPGVSKLPNYNPEWFPPPKPQSLQIVWDRLGGVPEAEDLASQMLKGFPRDRVSAQEALVHDYFSVLPSQLYQLPDEESLFAVSGVKLKPEMCDLS 417          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK11_MOUSE (Mitogen-activated protein kinase 11 OS=Mus musculus GN=Mapk11 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP-------PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 344
            GC+MAELL G+ LFPG   +DQL  I++V+GTP+ E +  ++  +       + P P     QK L        P A+DL+ R      + R +A EA  H +F + RDP+   P   P
Sbjct:  210 GCIMAELLQGKALFPGNDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP-----QKDLSSVFHGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYRDPDDE-PEAEP 322          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY-----TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG----RPLPPLFNF 365
            GCVM E+L+G+ +F G+  + QL EI K+LG P +  I   NP Y     ++  F       + K F     P+ +DL+ +   Y P  R +      H FF+ELR+ +T LP G      LP LF+F
Sbjct:  227 GCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYF-GHSGPDGIDLLMKILVYEPQQRLSPRRILAHQFFNELRNDDTFLPRGFTEPIKLPNLFDF 353          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPDMSELSGI----PPETINRLIPEHARKQNLF 455
            AGC+ AELLL +P   G S +DQL +I    GTP  +   ++ C+ P+Y E++F    P P  +     +  +A+DL+ + F Y P  R +  +A  H +F     P   L   RP+    + K  D S+L  I    P     R++P+  +  N F
Sbjct:  195 AGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICL-PDYVEYQF---VPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLPRPVSKQ-DAKSSD-SKLEAIKVLSPAHKFRRVMPDRGKSGNGF 345          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
CDK7_HUMAN3.899e-1237.40Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
HOG1_ZYGRO5.092e-1239.25Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_TORDE6.651e-1238.32Mitogen-activated protein kinase HOG1 OS=Torulaspo... [more]
HOG1_KLULA6.651e-1236.45Mitogen-activated protein kinase HOG1 OS=Kluyverom... [more]
MK14_XENLA8.686e-1231.94Mitogen-activated protein kinase 14 OS=Xenopus lae... [more]
MK14A_DANRE8.686e-1234.11Mitogen-activated protein kinase 14A OS=Danio reri... [more]
CDK15_MOUSE8.686e-1237.31Cell division protein kinase 15 OS=Mus musculus GN... [more]
MK11_MOUSE1.134e-1135.29Mitogen-activated protein kinase 11 OS=Mus musculu... [more]
MCK1_YEAST1.134e-1135.16Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
CDKD1_ARATH1.134e-1131.21Cyclin-dependent kinase D-1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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