CX291754

Overview
NameCX291754
Unique NameCX291754
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE---IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 359
            GC++AE+L G+PLFPG+    QL  I+ VLGTPT E+   IK           P  K  P+  +F K     A+DL+ +   ++P  R T  EA  HP+ +   DP    P   P+P  F
Sbjct:  213 GCILAEMLSGKPLFPGKDYHHQLTLILDVLGTPTMEDYYGIKSRRAREYIRSLPFKKKVPFRTLFPK-TSDLALDLLEKLLAFNPVKRITVEEALKHPYLEPYHDPEDE-PTAPPIPEEF 330          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_USTMA (Mitogen-activated protein kinase HOG1 OS=Ustilago maydis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE+L G+PLFPG+  V+Q   I ++LGTP  E IK + + N   F    P+ +  P+ + F K   P A+DL+ +   + P  R +A EA  HP+     DP
Sbjct:  200 AGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDEVIKTICSENTLRFVQSLPKRERVPFSQKF-KNADPMALDLLEKMLVFDPRTRISAAEALAHPYLAPYHDP 305          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK15_HUMAN (Cell division protein kinase 15 OS=Homo sapiens GN=CDK15 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGV-DQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQK-RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK-PPDMSEL 389
            AGC+  E+  GQPLFPG S + +QL +I +VLG PT +    ++  PNY    FP   P   H V+ +    PEA DL  +  +  P  R +A EA VH +F  L     +LP+   L  +   +  P+M +L
Sbjct:  235 AGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTEDTWPGVSKLPNYNPEWFPLPTPRSLHVVWNRLGRVPEAEDLASQMLKGFPRDRVSAQEALVHDYFSALPSQLYQLPDEESLFTVSGVRLKPEMCDL 367          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL 347
            GC+ AELL  +P+FPG   ++QL  II +LG+   E+I+ ++ N    K+ +  P+     F +  P   P A+DL+ R   + P+ R + +EA  HP+   L DPNT  P   P+
Sbjct:  221 GCIFAELLGRKPVFPGTECLNQLKLIINILGSQREEDIEFID-NPKARKYIKSLPYSPGTPFSRLYPHAHPLAIDLLQRMLVFDPSKRISVIEALQHPYMSPLYDPNTDPPAQVPI 335          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 314
            GC+  EL+  +PLFPG   V QL  +++++GTP+ +++  +N N   +   Q+ P+   + FQ++ P   PEA+DLV +   + P  R T  +A  HP+   L D
Sbjct:  243 GCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFLNENAKRY-IRQLPPYR-RQSFQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHD 345          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: MK15_MOUSE (Mitogen-activated protein kinase 15 OS=Mus musculus GN=Mapk15 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH---KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 320
            GC++ E+L GQPLFPG S   QL  I+K +  P+ EE++ +  +Y+      +   P      +     PPEA+DL+ R   ++P+ R +A +A  HP+      P+
Sbjct:  206 GCILGEMLRGQPLFPGTSTFHQLELILKTIPLPSMEELQDLGSDYSALILQNLGSRPQQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHPYVQRFHCPD 312          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_DEBHA (Mitogen-activated protein kinase HOG1 OS=Debaryomyces hansenii GN=HOG1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH----PWHKVFQK--RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            GC+++E++ G+PLFPG+  V Q   I ++LG+P  + I+ +    T  +F Q  PH    P+ + F +   + PEA+DL+ +   + P  R +AL+A  HP+ +   DP
Sbjct:  204 GCILSEMIEGKPLFPGKDHVHQFSIITELLGSPPPDVIETICSENT-LRFVQSLPHRDPIPFSERFAQCSHVEPEAIDLLAKMLIFDPKKRISALDALSHPYMEPYHDP 311          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH----PWHKVFQK--RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            GC++AE++ G+PLFPG+  V Q   I ++LG+P  + I  +    T  +F Q  PH    P+ + F     + PEA+DL+ +   + P  R +A+E   HP+ +   DP
Sbjct:  204 GCILAEMIEGKPLFPGKDHVHQFSIITELLGSPPADVIDTICSENT-LRFVQSLPHRDPIPFSERFASCTHVEPEAIDLLAKLLVFDPKKRISAVEGLTHPYMEAYHDP 311          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: HOG1_ASHGO (Mitogen-activated protein kinase HOG1 OS=Ashbya gossypii GN=HOG1 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 3
Query:    6 AGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 317
            AGC+ AE++ G+PLFPG+  V Q   I  +LG+P ++ I  + + N  +F    P   P P+ + F K L P+AVDL+ +   + P  R TA +A  HP+     DP
Sbjct:  203 AGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPKDVIDTICSENTLKFVTSLPHRDPVPFTERF-KNLKPDAVDLLEKMLVFDPKKRITAGDALTHPYLAPYHDP 308          
BLAST of CX291754 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 3
Query:    9 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 308
            GC+  E+  G+PLFPG +  D+L  I ++LGTP++E    ++ N  +  + FP+ KP P       RL  E ++L+ +F QY    R +A EA  H +F  L
Sbjct:  376 GCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLIN-HAPRLDSEGIELITKFLQYESKKRVSAEEAMKHVYFRSL 476          
The following BLAST results are available for this feature:
BLAST of CX291754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MAPK_FUSSO1.482e-1136.67Mitogen-activated protein kinase OS=Fusarium solan... [more]
HOG1_USTMA1.482e-1138.32Mitogen-activated protein kinase HOG1 OS=Ustilago ... [more]
CDK15_HUMAN1.482e-1136.09Cell division protein kinase 15 OS=Homo sapiens GN... [more]
NTF3_TOBAC1.935e-1135.34Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
MMK1_MEDSA1.935e-1134.29Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MK15_MOUSE1.935e-1132.71Mitogen-activated protein kinase 15 OS=Mus musculu... [more]
HOG1_DEBHA1.935e-1133.94Mitogen-activated protein kinase HOG1 OS=Debaryomy... [more]
HOG1_CANAL1.935e-1133.94Mitogen-activated protein kinase HOG1 OS=Candida a... [more]
HOG1_ASHGO1.935e-1137.38Mitogen-activated protein kinase HOG1 OS=Ashbya go... [more]
CDK17_HUMAN1.935e-1136.27Cell division protein kinase 17 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionC04004C04SK FlavFr1 Citrus clementina cDNA clone C04004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291754 ID=CX291754; Name=CX291754; organism=Citrus clementina; type=EST; length=571bp
ACGAGGCGGGTTGTGTGATGGCTGAGTTGCTTCTTGGACAGCCTTTGTTT
CCTGGTGAAAGTGGAGTTGACCAACTAGTTGAGATTATCAAGGTTTTGGG
AACACCAACCCGAGAGGAGATAAAGTGCATGAATCCAAACTATACAGAAT
TTAAGTTCCCACAGATAAAGCCTCATCCGTGGCACAAGGTCTTCCAAAAG
CGTTTACCCCCAGAAGCTGTGGACCTCGTCTGTAGATTTTTCCAGTACTC
TCCCAACTTACGATGCACTGCTCTGGAAGCTTGTGTTCACCCTTTCTTTG
ATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGTCGCCCCCTTCCA
CCCCTGTTTAATTTTAAACCTCCAGATATGTCAGAGCTTTCGGGCATCCC
ACCTGAAACCATCAACAGACTCATCCCAGAGCACGCTCGTAAGCAGAACT
TATTCATGGCTTTGCACTCTTAGCATCTGTTACAAGTCTCCTCCGTAAGT
TTATCTTGAACGTTTTATCGACACTTGTAAAAATCCGTCACCGGTTTTTC
ATTTATCATTGTCTCTTTAGT
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