CX291755

Overview
NameCX291755
Unique NameCX291755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length569
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38
Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+LLM  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   DI++FE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TL+++M+R  KD +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLLMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSTSDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINQMER--KDAQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.168e-38
Identity = 83/155 (53.55%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG++S +SDGA A+L+M    A + GL I    RS +  G DP++MG GP  A   A+K AGL IDDI+LFE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +G+R   TL++ M+R G   + GV +MCIG G G A VFER
Sbjct:  234 TAGSSSALSDGASAMLIMSEEKANELGLTIRAKIRSMAVSGCDPAIMGYGPVPATKKALKRAGLSIDDIDLFELNEAFAAQSLPCIKDLGLFDVMEEKINLNGGAIALGHPLGCSGSRIATTLINNMERTG--AKLGVATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.137e-38
Identity = 81/152 (53.29%), Postives = 109/152 (71.71%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            T  NAS ++DGA AV+LMK+S A ++GL  L    S+S VGV+PS+MGIGP  AI  AV  AG  ++D+++FEINEAFA+     +K+LGL+PEKVN+ GGA+ALGHPLGA+G R + TLL  ++R G+    GV ++CIG GMG A   +R
Sbjct:  247 TPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRS--RGVAALCIGGGMGIAMCVQR 396          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.137e-38
Identity = 86/155 (55.48%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   DI+LFE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TLL+ M+R  KD +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLVMSESRARELGLQPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLAASDIDLFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.403e-38
Identity = 84/155 (54.19%), Postives = 108/155 (69.68%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL+++DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A +FER
Sbjct:  234 TAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATIFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_ENTCL (3-ketoacyl-CoA thiolase OS=Enterobacter cloacae GN=fadA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.057e-38
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   DI+LFE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TL++ M+  GKD +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLVMSESRARELGLTPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASDIDLFEMNEAFAAQILPCIKDLGLMGQIDEKINLNGGAIALGHPLGCSGARISTTLINLME--GKDAQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.216e-38
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL++ DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.216e-38
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL++ DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.216e-38
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL++ DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.216e-38
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL++ DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATVFER 386          
The following BLAST results are available for this feature:
BLAST of CX291755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_KLEP71.857e-3854.843-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADA_ALISL3.168e-3853.553-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida ... [more]
THIC_HUMAN4.137e-3853.29Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
FADA_CITK84.137e-3855.483-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADA_YERE85.403e-3854.193-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_ENTCL7.057e-3854.843-ketoacyl-CoA thiolase OS=Enterobacter cloacae GN... [more]
FADA_YERPS9.216e-3854.843-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_YERPP9.216e-3854.843-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADA_YERPN9.216e-3854.843-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERPE9.216e-3854.843-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA... [more]

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Properties
Property NameValue
Genbank descriptionC04004C05SK FlavFr1 Citrus clementina cDNA clone C04004C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291755 ID=CX291755; Name=CX291755; organism=Citrus clementina; type=EST; length=569bp
GAATTCGGCACGAGGCGACAACTGCTGGGAATGCTAGCCAGGTCAGTGAT
GGAGCTGGAGCAGTTCTTCTTATGAAGAGAAGTTTGGCTGTGCAGAAGGG
TCTTCCAATTCTTGGTGTGTTCAGGAGTTTTTCTGCTGTTGGTGTAGATC
CTTCTGTCATGGGCATAGGCCCAGCTGTTGCAATACCTGCTGCAGTGAAG
TCTGCAGGTCTTCAGATTGATGATATTAATTTGTTTGAGATAAATGAGGC
ATTTGCATCCCAGTATGTTTATTGTATTAAGAAACTGGGGCTTGATCCTG
AAAAAGTCAATGTTAATGGAGGTGCAGTGGCTCTTGGGCATCCTCTGGGT
GCGACAGGTGCACGCTGTGTTGCAACTCTATTGAGTGAGATGAAGCGTCG
TGGCAAAGATTGTCGATTTGGAGTGATCTCCATGTGCATAGGCTCAGGCA
TGGGGGCTGCAGCAGTTTTCGAGAGAGGAGATTGTGTTGACGAACTATGC
AATGCTCGAATGGTTCCAACTCACACCCACTTGTCAAAGGATGCCAAGTA
GATGCATTTGTTTGCAATT
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