CX291755

Overview
NameCX291755
Unique NameCX291755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length569
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37
Identity = 84/155 (54.19%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL   DI +FE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TLL+ M+   KD +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEH--KDVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37
Identity = 84/155 (54.19%), Postives = 105/155 (67.74%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   DI +FE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TLL+ M+   KD +FG+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEH--KDVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37
Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA A+++M+ S A+  GL  L   +S+++ GV P++MG+GP  A   A++ AGLQ+ DI+L E NEAFA+Q++   K LG D EKVNVNGGA+ALGHP+GA+GAR + TLL  M+ R K    G+ ++CIG G G A V ER
Sbjct:  243 TAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDK--TLGLATLCIGGGQGIAMVIER 392          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 82/151 (54.30%), Postives = 104/151 (68.87%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 473
            TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A   A++ AG +I D++L E NEAFA+Q     K LG DP  VNVNGGA+A+GHP+GA+GAR + TLL EMKRRG   R G+ ++CIG GMG A   E
Sbjct:  242 TAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRG--ARKGLATLCIGGGMGVAMCIE 390          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA AVLLM    A Q GL  L + + ++  G +P +MGIGP  A   A+  AG  ++D++L E NEAFA+Q +   K+LG   +KVNVNGGA+ALGHP+GA+G R + TLL EM+RRG   + G+ ++CIG GMG A   ER
Sbjct:  242 TAGNASGINDGAAAVLLMSTQKADQLGLKPLAIIKGYALTGCEPEIMGIGPVSATRKALSKAGWTVEDLDLVEANEAFAAQALGVAKELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRRG--AKKGLATLCIGGGMGVALAVER 391          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36
Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG++S +SDGA A+L+M    A + GL I    +S +  G DPS+MG GP  A   A+K AGL IDDI + E+NEAFA+Q + C K LGL     EKVN+NGGA+ALGHPLG +G+R   TL+++M+    D +FG+ +MCIG G G A VFER
Sbjct:  234 TAGSSSALSDGASAMLVMSEHRAKELGLTIRARVKSMAVAGCDPSIMGYGPVPATQKALKRAGLSIDDIGMVELNEAFAAQSLPCAKDLGLLDKIDEKVNLNGGAIALGHPLGCSGSRISTTLINQMEHH--DVQFGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 5.057e-36
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 479
            T  NAS ++DGA AV+LMK++ A ++ L  L    S+S  GV+PSVMG+GP  AI  AV  AG  ++D++LFEINEAFA+      K+LGL+PEKVN++GGA+ALGHPLGA+G R + TLL  ++R G     GV ++CIG GMG A   +RG
Sbjct:  247 TPANASGMNDGAAAVVLMKKTEAERRMLKPLARIVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAAVSAAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVTLLHTLERVGG--TRGVAALCIGGGMGVAMCVQRG 397          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.057e-36
Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA A++L+  S A   GL  +   RS+++ GVDPSVMG+GP  A   A+K AG+ +DDI+L E NEAFASQ++   K L LD  K N++GGA+ALGHP+GA+GAR + TLL  +    KD + G+ ++CIG G G + + ER
Sbjct:  243 TAGNASGINDGAAALILVSESKAHALGLKAIAKIRSYASGGVDPSVMGLGPVPATQKALKKAGINLDDIDLIEANEAFASQFLGVGKDLNLDMNKTNIHGGAIALGHPIGASGARILVTLLHNLIE--KDKKLGLATLCIGGGQGISMIVER 392          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.626e-36
Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 3
Query:   15 ATTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGD 482
            + TAG++S +SDGA A+L+   S A   GL      RS +AVG DPS+MG GP  A   A+K AGL + DI + E+NEAFA+Q + C+K L L     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A + ER D
Sbjct:  232 SVTAGSSSALSDGASAMLITSESYAKNLGLKPRARIRSMAAVGCDPSIMGYGPVPATQMALKKAGLVLGDIGVIELNEAFAAQSLACLKGLNLLDSMDDKVNLNGGAIALGHPLGCSGARITTTLLNLMERR--DVQFGLATMCIGLGQGIATIIERMD 388          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35
Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 3
Query:   15 ATTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            + TAGNAS ++DGA AVLLM  + A   GLP+L    S+++ GVDP++MGIGP  A   A+  AG  ++ ++L E NEAFA+Q +   ++LG D  +VNVNGGA+ALGHP+GA+G R + TLL EM RR  D + G+ ++CIG G G A    R
Sbjct:  241 SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLARIASYASAGVDPAIMGIGPVSATRRALDKAGWSLEQLDLIEANEAFAAQSLAVGRELGWDAARVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR--DAKKGLATLCIGGGQGVALTLAR 392          
The following BLAST results are available for this feature:
BLAST of CX291755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_ECOL55.974e-3754.193-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
FADA_ECOK15.974e-3754.193-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ... [more]
ATOB_ECOLI5.974e-3751.97Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
THIL_ZOORA2.965e-3654.30Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
THIL_CHRVO2.965e-3650.66Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
FADA_PHOPR3.872e-3651.613-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
THIC_MOUSE5.057e-3652.29Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
ATOB_HAEIN5.057e-3650.00Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
FADA_PHOLL8.626e-3650.943-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
ATOB_PSEAE1.471e-3549.35Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]

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Properties
Property NameValue
Genbank descriptionC04004C05SK FlavFr1 Citrus clementina cDNA clone C04004C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291755 ID=CX291755; Name=CX291755; organism=Citrus clementina; type=EST; length=569bp
GAATTCGGCACGAGGCGACAACTGCTGGGAATGCTAGCCAGGTCAGTGAT
GGAGCTGGAGCAGTTCTTCTTATGAAGAGAAGTTTGGCTGTGCAGAAGGG
TCTTCCAATTCTTGGTGTGTTCAGGAGTTTTTCTGCTGTTGGTGTAGATC
CTTCTGTCATGGGCATAGGCCCAGCTGTTGCAATACCTGCTGCAGTGAAG
TCTGCAGGTCTTCAGATTGATGATATTAATTTGTTTGAGATAAATGAGGC
ATTTGCATCCCAGTATGTTTATTGTATTAAGAAACTGGGGCTTGATCCTG
AAAAAGTCAATGTTAATGGAGGTGCAGTGGCTCTTGGGCATCCTCTGGGT
GCGACAGGTGCACGCTGTGTTGCAACTCTATTGAGTGAGATGAAGCGTCG
TGGCAAAGATTGTCGATTTGGAGTGATCTCCATGTGCATAGGCTCAGGCA
TGGGGGCTGCAGCAGTTTTCGAGAGAGGAGATTGTGTTGACGAACTATGC
AATGCTCGAATGGTTCCAACTCACACCCACTTGTCAAAGGATGCCAAGTA
GATGCATTTGTTTGCAATT
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