CX291755

Overview
NameCX291755
Unique NameCX291755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length569
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 479
            T  NAS ++DGA AV+LMK++ A  + L  L    S+S  GV+PSVMG+GP  AI  AV  AG  ++D+++FEINEAFA+      K+LGL PEKVN++GGA+ALGHPLGA+G R + TLL  ++R G     GV ++CIG GMG A   +RG
Sbjct:  247 TPANASGMNDGAAAVVLMKKTEAESRMLKPLAQVVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVFEINEAFAAVSAAIAKELGLSPEKVNIDGGAIALGHPLGASGCRILVTLLHTLERVGG--TRGVAALCIGGGMGIAMCVQRG 397          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.278e-35
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA  +++M +  A + G+  L    S+   GVDP +MG GP  A   A+++A + I+DI+L E NEAFA+Q V  I+ L +D  KVNVNGGA+A+GHP+G +GAR + TLL EMKRR  D + G+ ++CIG GMG   + +R
Sbjct:  242 TAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--DAKTGLATLCIGGGMGTTLIVKR 391          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.591e-35
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M    A + GL I    +  +  G DPS+MG GP  A   A+K AGL I+D+++ E+NEAFA+Q + C K LGL     EKVN+NGGA+ALGHPLG +GAR   TL++ M+   KD ++G+ +MCIG G G A VFER
Sbjct:  238 TAGTSSALSDGASAMLIMSEEKANELGLKIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLAIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEKVNLNGGAIALGHPLGCSGARISTTLINLME--AKDAKYGLATMCIGLGQGIATVFER 390          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.591e-35
Identity = 79/155 (50.97%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG---LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M+   A   GLPI    RS +  G D ++MG GP  A   A++ AGL ++DI+L E+NEAFA+Q + C+K LG   L  EKVN+NGGA+ALGHPLG +GAR   TL++ M+   KD   G+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLVMEEEKAKALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLGCSGARISTTLINLME--SKDATLGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.591e-35
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M    A   GL      R+ +  G D ++MG GP  A   A+K AGL I DI+LFE+NEAFA+Q + C+K LGL     EKVN+NGGA+ALGHPLG +GAR   TLL+ M+   KD   GV +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGAAAMLVMSADRAKALGLTPRAKIRAMAVAGCDAAIMGYGPVPATQKALKRAGLTIGDIDLFELNEAFAAQSLPCVKDLGLQDVVDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEE--KDATLGVATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIL_PARDE (Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.303e-35
Identity = 75/152 (49.34%), Postives = 102/152 (67.11%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA AVL+M    A ++GL  L    S++  GVDP +MG GP  A   A++ AG  + D++L E NEAFA+Q +   + +G DP  VNVNGGA+A+GHP+GA+G R + TLL EM+RR  D + G+ ++CIG GMG A   ER
Sbjct:  241 TAGNASGLNDGAAAVLVMTEDEAARRGLTPLARIASYATAGVDPQIMGTGPIPASRKALEKAGWSVGDLDLVEANEAFAAQAIAVNRDMGWDPSIVNVNGGAIAIGHPIGASGCRILNTLLFEMQRR--DAKKGLATLCIGGGMGVALCLER 390          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.303e-35
Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M    A + G+ I    +  +  G DPS+MG GP  A   A+K AGL I+D+++ E+NEAFA+Q + C K LGL     EKVN+NGGA+ALGHPLG +GAR   TL++ M+   KD ++G+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLME--AKDAKYGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.303e-35
Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M    A + G+ I    +  +  G DPS+MG GP  A   A+K AGL I+D+++ E+NEAFA+Q + C K LGL     EKVN+NGGA+ALGHPLG +GAR   TL++ M+   KD ++G+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLME--AKDAKYGLATMCIGLGQGIATVFER 386          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.246e-34
Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAGNAS ++DGA A LLM  + A ++G+  L    S++  GVDP +MG GP  A   A++ AG  + DI L E NEAFA+Q     K LG DP  VNVNGGA+A+GHP+GA+GAR + TLL EMKRRG     G+ ++CIG GMG A   ER
Sbjct:  243 TAGNASGLNDGAAAALLMTEAEAARRGIQPLARIVSWATAGVDPQIMGTGPIPASRKALEKAGWSVADIELVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARVLNTLLFEMKRRG--VSKGLATLCIGGGMGVAMCVER 392          
BLAST of CX291755 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.246e-34
Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = 3
Query:   21 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 476
            TAG +S +SDGA A+L+M+ S A   GLPI    RS +  G D ++MG GP  A   A+  AGL + D+++ E+NEAFA+Q + C+K LGL     EK+N+NGGA+ALGHPLG +GAR   TL++ M+   KD   G+ +MCIG G G A VFER
Sbjct:  234 TAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGLTVADLDVIELNEAFAAQSLPCVKDLGLQDVVEEKINLNGGAIALGHPLGCSGARISTTLINLMEE--KDATIGLATMCIGLGQGIATVFER 386          
The following BLAST results are available for this feature:
BLAST of CX291755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIC_RAT2.510e-3551.63Acetyl-CoA acetyltransferase, cytosolic OS=Rattus ... [more]
THLA_CLOD63.278e-3548.03Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
FADA_VIBPA5.591e-3550.323-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADA_SHELP5.591e-3550.973-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADA_AERHH5.591e-3552.263-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
THIL_PARDE7.303e-3549.34Acetyl-CoA acetyltransferase OS=Paracoccus denitri... [more]
FADA_VIBVY7.303e-3549.683-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADA_VIBVU7.303e-3549.683-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
THIL_RHIME1.246e-3451.97Acetyl-CoA acetyltransferase OS=Rhizobium meliloti... [more]
FADA_SHEDO1.246e-3449.683-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]

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Properties
Property NameValue
Genbank descriptionC04004C05SK FlavFr1 Citrus clementina cDNA clone C04004C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291755 ID=CX291755; Name=CX291755; organism=Citrus clementina; type=EST; length=569bp
GAATTCGGCACGAGGCGACAACTGCTGGGAATGCTAGCCAGGTCAGTGAT
GGAGCTGGAGCAGTTCTTCTTATGAAGAGAAGTTTGGCTGTGCAGAAGGG
TCTTCCAATTCTTGGTGTGTTCAGGAGTTTTTCTGCTGTTGGTGTAGATC
CTTCTGTCATGGGCATAGGCCCAGCTGTTGCAATACCTGCTGCAGTGAAG
TCTGCAGGTCTTCAGATTGATGATATTAATTTGTTTGAGATAAATGAGGC
ATTTGCATCCCAGTATGTTTATTGTATTAAGAAACTGGGGCTTGATCCTG
AAAAAGTCAATGTTAATGGAGGTGCAGTGGCTCTTGGGCATCCTCTGGGT
GCGACAGGTGCACGCTGTGTTGCAACTCTATTGAGTGAGATGAAGCGTCG
TGGCAAAGATTGTCGATTTGGAGTGATCTCCATGTGCATAGGCTCAGGCA
TGGGGGCTGCAGCAGTTTTCGAGAGAGGAGATTGTGTTGACGAACTATGC
AATGCTCGAATGGTTCCAACTCACACCCACTTGTCAAAGGATGCCAAGTA
GATGCATTTGTTTGCAATT
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