CX291764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_PSEP1 (Lipoyl synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lipA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.412e-27 Identity = 63/144 (43.75%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDL D G+ HFA +R+++ L P + +E LVPD+RG E+ A+ +VF HN+ETV L A R +++ SLD+L K VP TK+ +MLG GET ++V+ M ++R +D++T GQY++PS+ H+ Sbjct: 148 VITSVDRDDLRDGGAQHFADCIREIRALSPGVQLETLVPDYRGRMDVALEITAQEPPDVFNHNLETVPRLYKAARP-GSDYDWSLDLLQKFKQLVP-HVPTKSGLMLGLGETDEEVIEVMHRMREHDIDMLTLGQYLQPSRSHL 289
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_PSEA7 (Lipoyl synthase OS=Pseudomonas aeruginosa (strain PA7) GN=lipA PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 5.412e-27 Identity = 63/144 (43.75%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDL D G+ HFA +R++++L P + +E LVPD+RG E+ A +VF HN+ETV L + R ++F+ SLD+L K VP TK+ +MLG GET ++V+ M ++R +D++T GQY++PS+ H+ Sbjct: 138 VITSVDRDDLRDGGAQHFADCLREIRKLSPGIQLETLVPDYRGRMDIALEITANEPPDVFNHNLETVPRLYRSSRP-GSDFEWSLDLLQKFKQMVP-HVPTKSGLMLGLGETDEEVIEVMQRMREHDIDMLTLGQYLQPSRNHL 279
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_MYCPA (Lipoyl synthase OS=Mycobacterium paratuberculosis GN=lipA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27 Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 3 Query: 27 ITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRH 449 +T V RDDL D G+ +A+TVR +KEL P+ +E L+PDF G + EV S V AHN+ETV + +R +++SLDVL A++ AG +TK++++LG GETPD+V + + +R AG D++T QY+RPS RH Sbjct: 120 VTGVARDDLPDGGAWLYAETVRAIKELNPSTGVELLIPDFNGRPDRLAEVFGSRPEVLAHNVETVPRIFKRIRP-AFTYRRSLDVLTAARE---AGLVTKSNLILGLGETPDEVRTALADLRGAGCDIITITQYLRPSARH 256
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_MYCA1 (Lipoyl synthase OS=Mycobacterium avium (strain 104) GN=lipA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27 Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 3 Query: 27 ITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRH 449 +T V RDDL D G+ +A+TVR +KEL P+ +E L+PDF G + EV S V AHN+ETV + +R +++SLDVL A++ AG +TK++++LG GETPD+V + + +R AG D++T QY+RPS RH Sbjct: 120 VTGVARDDLPDGGAWLYAETVRAIKELNPSTGVELLIPDFNGRPDRLAEVFGSRPEVLAHNVETVPRIFKRIRP-AFTYRRSLDVLTAARE---AGLVTKSNLILGLGETPDEVRTALADLRGAGCDIITITQYLRPSARH 256
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_GRAFK (Lipoyl synthase OS=Gramella forsetii (strain KT0803) GN=lipA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27 Identity = 63/143 (44.06%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 V+TSVDRDDL D GS +A+TV+ ++ + P +E L+PDF+GN + + + V +HN+ETV+ L VR +A + +SL VL KD TK+ IMLG GE ++V+ T+ +R AGVDV+T GQY++PSK+H+ Sbjct: 111 VVTSVDRDDLKDMGSIVWAETVKAIRRMNPETTLETLIPDFQGNERNIDRIIEVAPEVVSHNMETVKRLTREVR-IQAKYDRSLAVLKYLKD--NGIRRTKSGIMLGLGEQEEEVIQTLKDLREAGVDVVTIGQYLQPSKKHL 250
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_AZOVD (Lipoyl synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=lipA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27 Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDL D G+ HFA +R+++ L P +E LVPD+RG ++ A +VF HN+ETV L A R A+F+ SLD+L K VPA TK+ +MLG GET ++V+ M ++R +D++T GQY++PS+ H+ Sbjct: 136 VITSVDRDDLRDGGAQHFADCLREIRRLSPGTQLETLVPDYRGRMEIALDITAAEPPDVFNHNLETVPRLYKASRP-GADFEWSLDLLEAFKKRVPA-VPTKSGLMLGLGETDEEVIEVMKRMREHEIDMLTLGQYLQPSRNHL 277
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_ANAMM (Lipoyl synthase OS=Anaplasma marginale (strain St. Maries) GN=lipA PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27 Identity = 63/143 (44.06%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDL D G+ HFA+ VR++++ ++ +E L PDF G + +A + +V+ HN+ETV L S VR RA + SL++L KD P G TK+ MLG GE+ ++V MD +R AGVD + GQY++P+K ++ Sbjct: 98 VITSVDRDDLPDGGASHFAKCVREIRKRDSSVTVEILTPDFLGKPCAIDIIASARPDVYNHNLETVPRLYSRVRP-RAKYFNSLNLLKEVKDKSP-GVFTKSGFMLGLGESKEEVYQVMDDLRCAGVDFIVMGQYLQPTKNNI 238
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_HAEDU (Lipoyl synthase OS=Haemophilus ducreyi GN=lipA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.232e-27 Identity = 64/144 (44.44%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDLAD+G+ HFA TVR++K L P +E LVPDFRG V + ++ +VF HN+E V L +R A++K SL++L + K P TK+ +M+G GET +++++ M +R GV ++T GQY++PS+ H+ Sbjct: 141 VITSVDRDDLADRGAAHFAATVREIKALNPECKVEILVPDFRGRVEQAVAILKQNPPDVFNHNLENVPRLYREIRP-GADYKWSLELLKIFKQEFP-NIPTKSGLMVGLGETNEEILAVMQDLRDHGVTMLTVGQYLQPSRHHL 282
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_ALCBS (Lipoyl synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=lipA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.206e-26 Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG-NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRH 449 VITSVDRDDLAD G+ HFA+ +R+++ L P IE L PDFR + V +A++ +VF HNIETV EL +R A ++ SLD+L K P TK+ IM+G GET +QV++T+ +R VD++T GQY++PSK H Sbjct: 132 VITSVDRDDLADGGAEHFAECIRQVRALTPETRIEILTPDFRPCLDTAVEILAETAPDVFNHNIETVPELYKHIRP-GARYQHSLDLLKRYKALRP-DVSTKSGIMVGLGETFEQVINTIKDLRTHDVDMITIGQYLQPSKHH 272
BLAST of CX291764 vs. ExPASy Swiss-Prot
Match: LIPA_VIBSL (Lipoyl synthase OS=Vibrio splendidus (strain LGP32) GN=lipA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.575e-26 Identity = 65/144 (45.14%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 24 VITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMDKVRAAGVDVMTFGQYMRPSKRHM 452 VITSVDRDDL D G+ HFA R+++E PN+ IE LVPDFRG E+ K +VF HN+ET L R AN+K SLD+L K+ P TK+ +M+G GET +++V + +R GV ++T GQY+ PS+ H+ Sbjct: 132 VITSVDRDDLRDGGAQHFADCNREIREQNPNIRIETLVPDFRGRMDVALELMKDNPPDVFNHNLETAPRLYRKARP-GANYKWSLDLLRKFKEQHP-NIPTKSGVMMGLGETKEEIVQVLKDLREHGVTMLTLGQYLAPSRHHL 273 The following BLAST results are available for this feature:
BLAST of CX291764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291764 ID=CX291764; Name=CX291764; organism=Citrus clementina; type=EST; length=453bpback to top |