CX291772

Overview
NameCX291772
Unique NameCX291772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A16_ARATH (1-aminocyclopropane-1-carboxylate synthase 6 OS=Arabidopsis thaliana GN=ACS6 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 1.639e-60
Identity = 118/190 (62.11%), Postives = 134/190 (70.53%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKP----------TKKRWQQNLRVSFS 547
            KDMGLPG RVGIVYS+ND VV   RKMSSFGLVSSQTQ+L+A MLSD+EFVD F+ E+  RLA RH   T GL+ +GI  LK+ AGLF WMDLR+LLK  T + E  LWR IV+ VKLNVSPG SF C EPGWFRVC ANMD  T++ AL RI  F  Q +E  KP           KK WQ NLR+SFS
Sbjct:  280 KDMGLPGLRVGIVYSYNDRVVQIARKMSSFGLVSSQTQHLIAKMLSDEEFVDEFIRESKLRLAARHAEITTGLDGLGIGWLKAKAGLFLWMDLRNLLKTATFDSETELWRVIVHQVKLNVSPGGSFHCHEPGWFRVCFANMDHKTMETALERIRVFTSQLEEETKPMAATTMMAKKKKKCWQSNLRLSFS 469          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A1C_DIACA (1-aminocyclopropane-1-carboxylate synthase OS=Dianthus caryophyllus GN=ACS2 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.768e-60
Identity = 115/211 (54.50%), Postives = 145/211 (68.72%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKP-----------------------------TKKRWQQNLRVSFSSR 553
            KDMG+PGFRVGI+YS+ND VV+  R+MSSFGLVSSQTQ+++A++LSDD+FV  FLVE+  RL +RH +FT  L ++GI CL+ NA LF WMDLRHLL E T+E E+ LWR I+N+VK+NVSPGSSF C+EPGWFRVC ANMD+ TL VALNRI +FV + +                                   KKR Q  LR+SF++R
Sbjct:  277 KDMGMPGFRVGIIYSYNDRVVSTARRMSSFGLVSSQTQFMIAALLSDDDFVRRFLVESRDRLFRRHQHFTSELAKIGIGCLQGNAALFVWMDLRHLLDEATVERELKLWRVIINEVKINVSPGSSFLCSEPGWFRVCFANMDNATLDVALNRIRSFVTRGRVDNSTMTTTSARAAATTTTTTTTTTTTTTTTTTIKKKRGQMELRLSFNNR 487          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A1C_PHAAU (1-aminocyclopropane-1-carboxylate synthase (Fragment) OS=Phaseolus aureus GN=ACS5 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.215e-55
Identity = 100/139 (71.94%), Postives = 117/139 (84.17%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIA 424
            KDMG PGFRVGI+YS+ND VVNC RKMSSFGLVS+QTQYLLASML+DDEFV+ FL E++KRLA+R   FT GL +VGI CL+SNAGLF WMDLR LLK+ T + E  LW+ I+++VK+NVSPG SF CTEPGWFRVC A
Sbjct:  230 KDMGFPGFRVGIIYSYNDAVVNCARKMSSFGLVSTQTQYLLASMLNDDEFVERFLAESAKRLAQRFRVFTGGLAKVGIKCLQSNAGLFVWMDLRQLLKKPTFDSETELWKVIIHEVKINVSPGYSFHCTEPGWFRVCFA 368          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A18_ARATH (1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana GN=ACS8 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.755e-54
Identity = 101/177 (57.06%), Postives = 128/177 (72.32%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKPTKKRWQQNLRV 538
            KD+GLPGFRVG++YS +D VV+   KMSSFGL+SSQTQYLL+++LSD  F  N+L E   RL  RH     GLE  GI CLKSNAGLF W+D+RHLLK  T E EI LW+ IV +VKLN+SPGSS  C EPGWFRVC AN+ ++TL+VAL+R+  FV    +   PT++   ++ R+
Sbjct:  272 KDLGLPGFRVGVIYSNDDFVVSAATKMSSFGLISSQTQYLLSALLSDKTFTKNYLEENQIRLKNRHKKLVSGLEAAGIECLKSNAGLFCWVDMRHLLKSNTFEAEIELWKKIVYEVKLNISPGSSCHCNEPGWFRVCFANLSEETLKVALDRLKRFV----DGPSPTRRSQSEHQRL 444          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A13_SOLLC (1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum GN=ACS3 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.309e-53
Identity = 104/196 (53.06%), Postives = 131/196 (66.84%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFV--------------QQDKESEKPTKKRWQQNLRVSFSSR 553
            KD+GLPGFR+G +YS ++ VV+   KMSSFGLVSSQTQYLL+ MLSD +F   ++ E  KRL KRH    KGL+  GINCL+SNAGLF W+D+RHLL     + E+ LW+ IV DV LN+SPGSS  CTEPGWFRVC ANM +DTL +A+ RI  FV              Q +  S+K +  +W    R+SF+ R
Sbjct:  272 KDLGLPGFRIGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSCMLSDKKFTKKYISENQKRLKKRHAMLVKGLKSAGINCLESNAGLFCWVDMRHLLSSNNFDAEMDLWKKIVYDVGLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMRRIKDFVESTAPNATNHQNQQQSNANSKKKSFSKWV--FRLSFNDR 465          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A111_ARATH (1-aminocyclopropane-1-carboxylate synthase 11 OS=Arabidopsis thaliana GN=ACS11 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.309e-53
Identity = 99/176 (56.25%), Postives = 125/176 (71.02%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKPTKKRWQQNLR 535
            KD+GLPGFRVG++YS N+ VV+   KMSSFGL+SSQTQ+LLA++LSD+ F  N+L E  KRL +R      GL++ GI+CLKSNAGLF W+DLRHLLK  T E E +LW  IV +V LN+SPGSS  C EPGWFRVC ANM D T++VA++R+  FV  +    K  +  W    R
Sbjct:  267 KDLGLPGFRVGLIYSNNEKVVSAATKMSSFGLISSQTQHLLANLLSDERFTTNYLEENKKRLRERKDRLVSGLKEAGISCLKSNAGLFCWVDLRHLLKSNTFEAEHSLWTKIVCEVGLNISPGSSCHCDEPGWFRVCFANMSDQTMEVAMDRVKGFV-DNNNGGKQKRTMWDTRRR 441          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A15_ARATH (1-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana GN=ACS5 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 9.629e-53
Identity = 103/197 (52.28%), Postives = 128/197 (64.97%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQD--------------KESEKPTKKRWQQNLRVSFSSRI 556
            KD+GLPGFRVG +YS ++ +V+   KMSSFGLVSSQTQYLL+++LSD +F   +L E  KRL  R      GLE  GI CL+SNAGLF W+D+RHLL   T E E+ LW+ IV +VKLN+SPGSS  CTEPGWFRVC ANM +DTL +AL R+  FV+                K   K T   W    RVS++ R+
Sbjct:  272 KDLGLPGFRVGAIYSNDEMIVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSQYLEENQKRLKSRQRRLVSGLESAGITCLRSNAGLFCWVDMRHLLDTNTFEAELDLWKKIVYNVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLALKRLKTFVESTDCGRMISRSSHERLKSLRKKTVSNWV--FRVSWTDRV 466          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A19_ARATH (1-aminocyclopropane-1-carboxylate synthase 9 OS=Arabidopsis thaliana GN=ACS9 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.258e-52
Identity = 106/195 (54.36%), Postives = 131/195 (67.18%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQ-------DKESE---KPTKKRWQQN--LRVSFSSRI 556
            KD+GLPGFRVG +YS ++ VV+   KMSSFGLVSSQTQYLL+++LSD +F   +L E  KRL  R      GLE  GI CLKSNAGLF W+D+RHLL   T E E+ LW+ IV DVKLN+SPGSS  CTEPGWFRVC ANM +DTL +A+ R+  +V+         K S    K  +KR   N   RVS++ R+
Sbjct:  272 KDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSTYLDENQKRLKIRQKKLVSGLEAAGITCLKSNAGLFCWVDMRHLLDTNTFEAELELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMKRLKEYVESTDSRRVISKSSHDRIKSLRKRTVSNWVFRVSWTDRV 466          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A14_ARATH (1-aminocyclopropane-1-carboxylate synthase 4 OS=Arabidopsis thaliana GN=ACS4 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.145e-52
Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKPTKKR 517
            KD+GLPGFRVG +YS +  V++   KMSSFGLVSSQTQYLL+S+LSD +F  N+L E  KRL  R      GLE +GI CLKSNAGLF W+D+R LL+ KT E E+ LW+ IV +VKLN+SPGSS  C EPGWFRVC ANM D+TL++AL R+   V  +  S +  K +
Sbjct:  273 KDLGLPGFRVGAIYSNDKDVISAATKMSSFGLVSSQTQYLLSSLLSDKKFTKNYLRENQKRLKNRQRKLVLGLEAIGIKCLKSNAGLFCWVDMRPLLRSKTFEAEMDLWKKIVYEVKLNISPGSSCHCEEPGWFRVCFANMIDETLKLALKRLKMLVDDENSSRRCQKSK 442          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A12_CUCMA (1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima GN=ACS2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.008e-50
Identity = 93/159 (58.49%), Postives = 119/159 (74.84%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQ 484
            KD+GLPGFRVG +YS +D VV    KMSSFGLVSSQTQYLL++MLSD +F  +++ E  KRL +R      GL++ GINCL SNAGLF W+D+RHLL+    E E+ LW+ IV +V LN+SPGSS  CTEPGWFRVC ANM + TL++A+ R+ +FV +
Sbjct:  272 KDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSAMLSDKKFTISYISENQKRLKQRQKMLVSGLQKAGINCLDSNAGLFCWVDMRHLLESDKFESELELWKKIVYEVGLNISPGSSCHCTEPGWFRVCFANMSESTLKLAVRRLKSFVTE 430          
The following BLAST results are available for this feature:
BLAST of CX291772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
1A16_ARATH1.639e-6062.111-aminocyclopropane-1-carboxylate synthase 6 OS=Ar... [more]
1A1C_DIACA4.768e-6054.501-aminocyclopropane-1-carboxylate synthase OS=Dian... [more]
1A1C_PHAAU1.215e-5571.941-aminocyclopropane-1-carboxylate synthase (Fragme... [more]
1A18_ARATH1.755e-5457.061-aminocyclopropane-1-carboxylate synthase 8 OS=Ar... [more]
1A13_SOLLC3.309e-5353.061-aminocyclopropane-1-carboxylate synthase 3 OS=So... [more]
1A111_ARATH3.309e-5356.251-aminocyclopropane-1-carboxylate synthase 11 OS=A... [more]
1A15_ARATH9.629e-5352.281-aminocyclopropane-1-carboxylate synthase 5 OS=Ar... [more]
1A19_ARATH1.258e-5254.361-aminocyclopropane-1-carboxylate synthase 9 OS=Ar... [more]
1A14_ARATH2.145e-5257.651-aminocyclopropane-1-carboxylate synthase 4 OS=Ar... [more]
1A12_CUCMA2.008e-5058.491-aminocyclopropane-1-carboxylate synthase CMA101 ... [more]

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Properties
Property NameValue
Genbank descriptionC04004F05SK FlavFr1 Citrus clementina cDNA clone C04004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291772 ID=CX291772; Name=CX291772; organism=Citrus clementina; type=EST; length=556bp
CACGAGGAAGGACATGGGGCTCCCTGGCTTTAGAGTTGGCATTGTGTACT
CGTTTAATGATACTGTTGTGAATTGCGGCCGCAAGATGTCGAGCTTCGGT
TTAGTCTCTTCGCAGACTCAGTACTTGCTTGCTTCAATGCTCTCTGATGA
TGAGTTTGTCGATAACTTTCTCGTGGAGACCTCCAAGAGGTTAGCTAAGA
GACACCATAATTTCACCAAGGGACTTGAACAAGTTGGAATCAACTGCTTG
AAAAGCAATGCGGGTCTTTTTTTTTGGATGGACTTGCGTCATCTGCTTAA
GGAAAAAACATTAGAAGGTGAAATTGCTCTGTGGCGCACCATTGTCAACG
ATGTGAAGCTCAATGTTTCGCCTGGCTCTTCGTTTCAGTGTACTGAGCCT
GGTTGGTTTAGGGTTTGCATTGCTAACATGGATGATGACACATTGCAAGT
TGCACTAAACCGAATTGCCGCATTTGTGCAACAGGATAAGGAAAGCGAGA
AACCAACCAAGAAACGTTGGCAGCAGAATCTTCGCGTCAGCTTCTCATCG
AGGATC
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