CX291777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.675e-45 Identity = 89/188 (47.34%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPL 564 EKIH++AP IYCCGAG AAD E T MV+S+++LH TGRE RV T +L++ LF YQG+V A+L++GGVD TGP L+ ++PHGS LPF +GSG AA+A+ E +++ +T + L+V+A+ +GI DLGSG NVD CVITK + LR P + + + P T VL + PL Sbjct: 71 EKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPL 258
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.563e-45 Identity = 94/190 (49.47%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKG-YSF-PKKTEVLLTKITPL 564 EKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+LV+GGVD GP L+ ++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI +DLGSG NVD CVIT G + R L P V G Y F P T VL ++ PL Sbjct: 71 EKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQR--ALSTPTEPVQRAGRYRFAPGTTPVLTREVRPL 258
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.784e-45 Identity = 91/189 (48.15%), Postives = 122/189 (64.55%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSF-PKKTEVLLTKITPL 564 EKIH++AP IYCCGAG AAD E T M +S ++LH TGRE RV T +L++ LF YQGYV A+L++GGVD TGP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI DLGSG NVD CVIT + LR P + + Y F P T VL + PL Sbjct: 71 EKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGGNVDACVITAAGAKMLRALSSPT-KPIERSSQYRFAPGTTPVLSQTVVPL 258
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.286e-43 Identity = 79/150 (52.67%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKG 450 EKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+L++GGVD GP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI DLGSG +VD CVIT G Sbjct: 71 EKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGGSVDACVITAG 220
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB7_ENCCU (Probable proteasome subunit beta type-7 OS=Encephalitozoon cuniculi GN=PUP1 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.927e-33 Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 4 KIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNH 474 KIH + I CCGAGTAAD V M S +L+L + R V + +HL Y G + AAL++GG+D G HL+ I+PHGS ++ F ++GSGSL A+A ES+Y+ + KDE I L DA+ +GI NDL SGSN+DVCVI E+LRN+ Sbjct: 39 KIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRYR-AMDKDEAIDLACDAVKAGILNDLYSGSNIDVCVIDYSGVEFLRNY 194
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.530e-16 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 4 KIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDC-TGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKE 459 KI + IYCC +G+AADT+A++D V L++H E V TA +L + ++ + + A +++ G D G ++ I GS PFA GSGS +SK+K +TKDE I+ V +++ +F D SG + +C+I K E Sbjct: 47 KITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVE 199
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.609e-16 Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITK 447 +KI + N+Y C +G+AAD++ V+D V L H G+ + V A L + +N + +Q +++GG D G ++ I P G+ PFA GSGS F+ +KEG+T++E +LVV A+ I D SG V I K Sbjct: 45 DKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINK 194
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16 Identity = 44/154 (28.57%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKE 459 +K+ + NI+CC +G+AADT+ V D++ L ++R G + V TA TL + + + + A L++ G D TG +++I GS P A GSGS ++ ++E +T++E ++ + +A+ + D SG + + ++ K E Sbjct: 56 DKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGME 209
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15 Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVI 441 +KI + N+Y C +G+AAD++ V+D V L H G+ + V + L++ +N + +Q L++GG D G ++ I G+ PFA GSGS F+ +K+ +TK+E QLVV A+ I D SG V +I Sbjct: 44 DKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVII 191
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.427e-15 Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITK 447 +K+ + I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G PFA GSGS ++ Y+EG+TK+E +Q +A+ + D SG + + I + Sbjct: 66 DKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAE 215 The following BLAST results are available for this feature:
BLAST of CX291777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291777 ID=CX291777; Name=CX291777; organism=Citrus clementina; type=EST; length=568bpback to top |