CX291777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1 Query: 4 KIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQ--AALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITK-GHKE 459 KIH + ++ GAG D + ++ ++ +L+ +G+ V TLL ++ N Y A ++GG D P L+++ G +AT GSG A ++ +S+YK+ LT +EGI+L V AI + I D+ SG + V ITK G+KE Sbjct: 43 KIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLA-NIMNGAKYFPYLAWFLVGGYD-EKPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGYKE 195
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB9_ORYLA (Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 41/138 (29.71%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 4 KIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSG 417 K+ + IYC +G+AAD + + +MV+ QL +H + +V +A TL+K + Y+ + A L++ G D G PFA GSGS +++Y+ G+TK+E + VV+ + + D SG Sbjct: 51 KLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSG 188
BLAST of CX291777 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 49/164 (29.88%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 1 EKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCT--GPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKG---HKEYLRNHL 477 +K+ + IYC +G+AAD +AV DM + QL+LH V+ A +++ + Y+ + A L++ G D G T+ G PFA GSGS ++ YK G++ +E + DAI + D SG + + IT H+ L N L Sbjct: 52 DKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTL--GGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGVDHRVILGNEL 213 The following BLAST results are available for this feature:
BLAST of CX291777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291777 ID=CX291777; Name=CX291777; organism=Citrus clementina; type=EST; length=568bpback to top |