CX291793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 283 F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E +Y++R R + E Sbjct: 63 FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15 Identity = 36/97 (37.11%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 286 +K+ ++ E YP K P+V FV++++HPN+ + G++CLD++ WSP++D+ + S + LL PNP+ P N EAA L ++ Y +V+E E+ Sbjct: 49 WKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEK 145
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 283 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN EY R R + E Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 286 FKL + E YP +PP +RF++ ++HPNI + G ICLD+L + W P ++A +LT IQ L+ +PNP+ P ++ + F NK + + R+ E+ Sbjct: 51 FKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEK 149
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 283 F++ L +D+P PP F++++FHPN+ ++G IC+++L+ W + +L +I+ LL PNP S N EA RL EN EY R R + E Sbjct: 60 FRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTE 153
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 33/90 (36.67%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 271 FK +Q ++YP+ PP V+ +++++HPNI +G++CL+IL+ W+P+ ++ +IL +Q L PN P N EAA ++ + + RVR Sbjct: 70 FKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 283 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W + +L +I+ LL PNP S N EA RL EN EY R R + E Sbjct: 60 FRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTE 153
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 271 F L+F +DYP PP + F + HPNIY +G +C+ IL + +WSP+ V IL S+ S+L +PN S AN +A L+ +N+ E+ R+V+ Sbjct: 54 FNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVK 156
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 29/90 (32.22%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 271 F+ + ++P++PP V+ + +++HPNI +G++CL+IL+ W P+ + A++ +Q L +PN + P N +AA + N+ E+ R V+ Sbjct: 71 FRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.431e-14 Identity = 34/88 (38.64%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 262 F + ++ +YP KPP ++F ++++HPNI + G+ICLDIL+N WSP+ + + L S+Q+LL P PN P ++E A+ + ++ +N+ Sbjct: 52 FVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNK 139 The following BLAST results are available for this feature:
BLAST of CX291793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 222
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291793 ID=CX291793; Name=CX291793; organism=Citrus clementina; type=EST; length=650bpback to top |