CX292056

Overview
NameCX292056
Unique NameCX292056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio parahaemolyticus GN=cysJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH+++E +  +W  + +GAY+YVCGDA  MA+DVH  L  + +++G +    AE  + +L+   RY RDV+
Sbjct:  551 YVQHRILENAAQVWQWIQDGAYIYVCGDATRMAKDVHDALVIVAEQEGKMPRDDAEQFINDLRKAKRYQRDVY 623          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus (strain YJ016) GN=cysJ PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  544 YVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRGDAEEFINDLRKAKRYQRDVY 616          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus GN=cysJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  544 YVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRDDAEEFINDLRKAKRYQRDVY 616          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_PHOPR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Photobacterium profundum GN=cysJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH+++E +  +W  L EGA++YVCGD   MA+DVH  L T++++QG     +AE  +  L+ + RY +DV+
Sbjct:  533 YVQHRVLEHAEQVWQWLQEGAHVYVCGDMNHMAKDVHDALLTVIEQQGKQSREQAEQYLNELRKSKRYQKDVY 605          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SERP5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Serratia proteamaculans (strain 568) GN=cysJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.256e-13
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  + EGA++YVCGDA  MA+DV  TL  +V E G +D+  A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAKDVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_RABIT (NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH +      +W ++ EG A++YVCGDA+ MARDV  T + IV E G+++ ++A   VK L   GRY  DVW
Sbjct:  605 YVQHLLRRDKEHLWRLIHEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYVKKLMTKGRYSLDVW 678          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ EK+ +IW  + E GAYLYVCGDA  MA+DV + L  I++++G +D   A+  +  L++  RY RDV+
Sbjct:  533 YVQDKLREKAAEIWKWIKEDGAYLYVCGDATHMAKDVDKALIDIIRQEGGMDEEAADEFLTELRLERRYQRDVY 606          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_KLEP7 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV  TL  ++ E G++D+  A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVENTLLEVIAEYGAMDAEAADEFLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_YERE8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.617e-12
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L++  RY RDV+
Sbjct:  529 YVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRLARRYQRDVY 601          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  I  E G L S  AE   + L+   RY +DV+
Sbjct:  532 YVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLAIAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
The following BLAST results are available for this feature:
BLAST of CX292056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CYSJ_VIBPA1.910e-1341.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBVY2.495e-1341.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBVU2.495e-1341.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_PHOPR2.495e-1342.47Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SERP54.256e-1343.84Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_RABIT9.482e-1345.95NADPH--cytochrome P450 reductase OS=Oryctolagus cu... [more]
CYSJ_ZYMMO9.482e-1345.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_KLEP79.482e-1341.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERE81.617e-1241.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESR2.112e-1245.21Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionC04010A05SK FlavFr1 Citrus clementina cDNA clone C04010A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292056 ID=CX292056; Name=CX292056; organism=Citrus clementina; type=EST; length=551bp
AGAGTCGATTGAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACA
ATGCTACGCCTAGCGAGTAACGATAATTACCATATTCTGTATTTATAAAT
TACATGAACAAAAAATTCCTTCATATGGTAAGGGTAAAAAAGAAAAAAAA
AAAGAAAAAAAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACC
CACGCAAATAGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGACCCGAGA
TAACATATTTATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGA
GAAGACTCAGGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGC
CAGTCATTTGCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGA
GATCCCTGCTCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGC
CATGCCTTTGGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCA
TGTTCCAGATATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCC
T
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