CX292056

Overview
NameCX292056
Unique NameCX292056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.027e-12
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  529 YVQDKLREQGAELWRWINDGAHIYVCGDANCMAKDVEQALLEVIAEFGGMDAEAADEFLSELRVERRYQRDVY 601          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_SALTR (NADPH--cytochrome P450 reductase (Fragments) OS=Salmo trutta PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH + +   D+W  + E  A++Y+CGDA+ MARDV    + I +E G +  ++A   +K L   GRY +DVW
Sbjct:  527 YVQHLLRKNKVDLWRQIHEDYAHIYICGDARNMARDVQTAFYEIAEELGGMTRTQATDYIKKLMTKGRYSQDVW 600          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_CAVPO (NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH +      +W ++ E GA++YVCGDA+ MARDV  T   I  E G ++ ++A   VK L   GRY  DVW
Sbjct:  604 YVQHLLKRDQEHLWKLIHEDGAHIYVCGDARNMARDVQNTFCNIAAELGGMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella choleraesuis GN=cysJ PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G++D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALAR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLRERGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIVEFGGMDLESADEYLSELRVARRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIBS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella boydii serotype 4 (strain Sb227) GN=cysJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDIEAADEFLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_ASPNG (NADPH--cytochrome P450 reductase OS=Aspergillus niger GN=cprA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQH++ E S  + ++L + A  YVCGDA  MAR+V+  L  I+  Q  L + K E MVK+++  GRY  DVW
Sbjct:  620 YVQHRLREHSELVSDLLKQKATFYVCGDAANMAREVNLVLGQIIAAQRGLPAEKGEEMVKHMRRRGRYQEDVW 692          
The following BLAST results are available for this feature:
BLAST of CX292056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CYSJ_CITK88.027e-1239.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_SALTR1.048e-1140.54NADPH--cytochrome P450 reductase (Fragments) OS=Sa... [more]
NCPR_CAVPO1.048e-1144.59NADPH--cytochrome P450 reductase OS=Cavia porcellu... [more]
CYSJ_SALCH1.048e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALAR1.048e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIBS1.369e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY1.369e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTI1.369e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB1.369e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_ASPNG1.788e-1145.21NADPH--cytochrome P450 reductase OS=Aspergillus ni... [more]

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Properties
Property NameValue
Genbank descriptionC04010A05SK FlavFr1 Citrus clementina cDNA clone C04010A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292056 ID=CX292056; Name=CX292056; organism=Citrus clementina; type=EST; length=551bp
AGAGTCGATTGAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACA
ATGCTACGCCTAGCGAGTAACGATAATTACCATATTCTGTATTTATAAAT
TACATGAACAAAAAATTCCTTCATATGGTAAGGGTAAAAAAGAAAAAAAA
AAAGAAAAAAAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACC
CACGCAAATAGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGACCCGAGA
TAACATATTTATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGA
GAAGACTCAGGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGC
CAGTCATTTGCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGA
GATCCCTGCTCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGC
CATGCCTTTGGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCA
TGTTCCAGATATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCC
T
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