CX292056

Overview
NameCX292056
Unique NameCX292056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_BLOFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Blochmannia floridanus GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K++    ++W+ + +GAY+YVCGDAK MARDV + L T+V   G+++  ++      +++  RY RD++
Sbjct:  538 YVQDKLLSNGLELWDWIQKGAYIYVCGDAKYMARDVEQALVTVVSIHGNMNMDQSNDFWNEMRVQHRYQRDIY 610          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi A GN=cysJ PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G++D   A+  +  L++  RY RDV+
Sbjct:  527 YVQDKLREQGAELWRWINDGAHIYVCGDARCMAVDVEKALLEVIAEFGAMDIESADEYLSELRVERRYQRDVY 599          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_ENT38 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Enterobacter sp. (strain 638) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E+  ++W  ++ GA+LYVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  529 YVQDKLREQGAELWAWINNGAHLYVCGDANRMAKDVEQALLEVIAEFGGMDIETADEFLSELRVERRYQRDVY 601          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E   ++W  +++GA +YVCG+A  MA+DV + L  +  + GS+D  ++   + NL++T RY RDV+
Sbjct:  530 YVQDKIRENGKELWEWVNQGAQIYVCGNASKMAKDVEKELLDVFSKNGSMDIEESSEFLNNLRITRRYQRDVY 602          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_CANMA (NADPH--cytochrome P450 reductase OS=Candida maltosa GN=NCP1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ E S  + ++L+EGA +YVCGDA  MARDV  T+  IV +   +   KA  +VK+ ++  RY  DVW
Sbjct:  608 YVQDKIAENSKVVNDLLNEGAIIYVCGDASRMARDVQSTIAKIVAKHREIQEDKAVELVKSWKVQNRYQEDVW 680          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: NCPR_YEAST (NADPH--cytochrome P450 reductase OS=Saccharomyces cerevisiae GN=NCP1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ K+ +    ++ M++ GA++YVCGDAKGMA+ V   L  I+    S+ + +A  ++K L+ +GRY  DVW
Sbjct:  619 YVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 691          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ ++ E S +IW+ + EGA +YVCG+A  MA+DV + L  I+     L+  +++  + NL++  RY RDV+
Sbjct:  529 YVQDRIRENSQEIWSWIEEGAQIYVCGNASKMAKDVEKALLDIISHNAHLNLEESQEFLNNLRLNKRYKRDVY 601          
BLAST of CX292056 vs. ExPASy Swiss-Prot
Match: CYSJ_BAUCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=cysJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 27/73 (36.99%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  328 YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 546
            YVQ +++EK  ++WN + +GA++YVCG+A  MARDV + L  ++   G +D  +A+  +  L++  R+ RD +
Sbjct:  523 YVQDRLLEKGIELWNWIQDGAHIYVCGNANLMARDVEKALVKLIAIHGRMDYEQADEFLSELRIARRFQRDTY 595          
The following BLAST results are available for this feature:
BLAST of CX292056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CYSJ_BLOFL1.788e-1138.36Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPA2.335e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ENT382.335e-1141.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BUCAP2.335e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_CANMA3.984e-1145.21NADPH--cytochrome P450 reductase OS=Candida maltos... [more]
NCPR_YEAST5.203e-1141.10NADPH--cytochrome P450 reductase OS=Saccharomyces ... [more]
CYSJ_BUCAI5.203e-1139.73Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BAUCH6.795e-1136.99Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionC04010A05SK FlavFr1 Citrus clementina cDNA clone C04010A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292056 ID=CX292056; Name=CX292056; organism=Citrus clementina; type=EST; length=551bp
AGAGTCGATTGAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACA
ATGCTACGCCTAGCGAGTAACGATAATTACCATATTCTGTATTTATAAAT
TACATGAACAAAAAATTCCTTCATATGGTAAGGGTAAAAAAGAAAAAAAA
AAAGAAAAAAAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACC
CACGCAAATAGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGACCCGAGA
TAACATATTTATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGA
GAAGACTCAGGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGC
CAGTCATTTGCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGA
GATCCCTGCTCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGC
CATGCCTTTGGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCA
TGTTCCAGATATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCC
T
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