CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            D+Y ILGV R C  +E+++AYR+L+ + HPD NK PG+EE FK++ +A++ LS+ ++R  YD  G
Sbjct:    4 DFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDRFG 68          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R   D  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRATIDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-SEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LGV RS + +EI+KAYRKL++K HPDKN     +EE FK+  +A++ LS+DD RR YD  G
Sbjct:    3 RDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_NOSP7 (Chaperone protein dnaJ OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV R    EE+++AYR+L+ K HPD NK PG+E+ FK++ +A++ LS+ ++R  YD  G
Sbjct:    3 RDYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRARYDRFG 68          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 45/145 (31.03%), Postives = 70/145 (48.28%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDE------LDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVF 457
            +DYY +LGV +  + ++I+ A+RK +++ HPD+NK P +EE FK+V +A++ LSD D R +YD  G                     H+  D +       DP +IF  FFG             RG  +   + F G+G   +F
Sbjct:    5 RDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFG---------------------HEGVDGQFGGGAGFDPFDIFNQFFG-----------GGRGGGAHFEQSFGGSGFEDIF 117          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDD--ELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQE 418
            KDYY ILGV R+ + EEIR+AY+KL  K HPD+N      +EE FK++ +A++ LSD + R  YD  G V +   N              D F D  +   ++IF  FFG Q   RT+   RT+  R  E
Sbjct:    4 KDYYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKLAEEKFKEIQEAYEVLSDPEKRAMYDKFGYVGDVPPNAGGGFRGFGGF--EDIFKDFGDFINNDIFNIFFGDQ---RTSSRKRTKTPRKGE 128          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITI (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Ikeda) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            DYY +LGV R+ S EEI++AYRKL LK HPD N     +E+  K + +A+  L D+  R  YD +G       +Q           QH  F   +DP++IF + FG
Sbjct:    5 DYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLG-------HQTFKNSGGGNYQQHHGFTGGIDPNDIFENIFG 103          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            DYY +LGV R+ S EEI++AYRKL LK HPD N     +E+  K + +A+  L D+  R  YD +G       +Q           QH  F   +DP++IF + FG
Sbjct:    5 DYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLG-------HQAFKNSGGGNYQQHHGFTGGIDPNDIFENIFG 103          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV +  S ++I++AYR+L+ K HPD N  PG+EE FKK+ +A++ LSD   R  YD  G
Sbjct:    4 QDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV +  S ++I++AYR+L+ K HPD N  PG+EE FKK+ +A++ LSD   R  YD  G
Sbjct:    4 QDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFG 69          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_SYNP21.696e-1347.69Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STAAU1.696e-1350.00Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]
DNAJ_PROA21.696e-1353.73Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_NOSP71.696e-1348.48Chaperone protein dnaJ OS=Nostoc punctiforme (stra... [more]
DNAJ_MYCPE1.696e-1331.03Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNAJ_THEM42.215e-1339.23Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNAJ_ORITI2.215e-1338.68Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_ORITB2.215e-1338.68Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_LACRJ2.215e-1350.00Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACRD2.215e-1350.00Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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