CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 2.796e-16
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDEL--DPDEIFRSFFGQQDMF 373
            KD+Y ILG+ER  S +EI+KAYRKL+LK HPDKNK+P +EE FK++ +A++ LSD   R  +D+ G     E   +          Q   +  +   DP   F  FFG  D F
Sbjct:    3 KDFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYG-----EDGLKGGQPGPDGGGQPGAYTYQFHGDPRATFAQFFGSSDPF 110          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDF--FDDELDPDEIFRSFFG 358
            +DYY ILGV ++ + EEI+KAYRKLS K HPD NK P + E FK++ +A++ LSDD  R HY      D+F H   +           DF  F      D+IF +FFG
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHY------DQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTFFG 105          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16
Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRT 379
            +DYY ILGV ++ + EEI+KAYRKLS K HPD NK P + E FK++ +A++ LSDD  R HYD  G  D    NQ              F  D+ D    F  F G +D+F T
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP---NQGFG----------GFRSDDFDLGG-FSGFGGFEDIFNT 102          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHD (Chaperone protein dnaJ OS=Bacillus halodurans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV+R+ S +E++KAYRKL+ K HPD NKAP +E+ FK+V +AF  LSD   + HYD  G  D
Sbjct:    4 RDYYEVLGVDRNASADEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAFDTLSDPQKKAHYDQFGHTD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.229e-16
Identity = 48/107 (44.86%), Postives = 58/107 (54.21%), Query Frame = 2
Query:   38 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            NKDYY ILGV +  S +EI+KAYRKLS K HPD NKAP +E+ FK V +A++ L D   R  YD  G  D                 Q  F D     ++IF SFFG
Sbjct:    4 NKDYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRAQYDQFGSAD-----PNAGFGGGGFGGQGGFSDFGGGFEDIFGSFFG 105          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15
Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYD---HVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            +DYY ILG+ R  + E+I+K+YRKL+LK HPD+NK PG+EE FK++ +A+  LSD + R  YD   H G+      N ++        A    F D      IF  FFG
Sbjct:    5 RDYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGHAGI------NGQYTAEDIFRGADFSGFGD------IFEMFFG 101          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY ILGV ++ + EEI+KAYRKLS K HPD NK P + E FK++ +A++ LSDD  R HYD  G  D
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHAD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV +S S +EI+KAYRKLS K HPD NK  GS+E FK+V +A++ LSDD  R  YD  G  D
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQFGHTD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV +S S +EI+KAYRKLS K HPD NK  G+ E FK+V +A++ LSDD  R HYD  G  D
Sbjct:    4 RDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            +DYY +LGV +S S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSD++ R +Y      D+F H+              DF   E    +IF SFFG
Sbjct:    4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANY------DQFGHDGPQGGFGSQGFGGSDFGGFE----DIFSSFFG 99          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ1_DROME2.796e-1641.59DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNAJ_BACTR3.652e-1643.52Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_BACST4.769e-1643.36Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_BACHD4.769e-1653.62Chaperone protein dnaJ OS=Bacillus halodurans GN=d... [more]
DNAJ_PEDPA6.229e-1644.86Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]
DNAJ_METTE1.062e-1541.28Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_GEOSW1.062e-1555.07Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_BACP21.062e-1556.52Chaperone protein dnaJ OS=Bacillus pumilus (strain... [more]
DNAJ_BACLD1.062e-1556.52Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]
DNAJ_STAES1.812e-1542.45Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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