CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFR--SFFGQQDMF 373
            +DYY ILG+ +  SVE+I+K YRKL+L+ HPD+NK PG+EE FK++ +A+  LSD + R  YD  G                     H   D++   ++IFR   F G  D+F
Sbjct:    5 RDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDRFG---------------------HAGIDNQYSAEDIFRGADFGGFGDIF 96          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV +S S +EI+KAYRKLS K HPD NK  G++E FK+V +A++ LSDD  R  YD  G  D
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV R  S EEI++AYR+L+ K HPD NK PG+E+ FK++ +A++ LSDD+ R  YD  G
Sbjct:    3 RDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRARYDRFG 68          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            +DYY +LGV +S S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSD++ R +Y      D+F H+              DF   E    +IF SFFG
Sbjct:    4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNY------DQFGHDGPQGGFGSQGFGGSDFGGFE----DIFSSFFG 99          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMF 373
            KDYY ILG+    + +EI+KAYRK++LK HPDKNK P +EE FK++ +A+  LSD   R  YD  G     E   +              +    DP   F SFFG  + F
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYG-----EEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSNPF 108          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMF 373
            KDYY ILG+    + +EI+KAYRK++LK HPDKNK P +EE FK++ +A+  LSD   R  YD  G     E   +         +    +    DP   F SFFG  + F
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYG-----EEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPF 108          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMF 373
            KDYY ILG+    + +EI+KAYRK++LK HPDKNK P +EE FK++ +A+  LSD   R  YD  G     E   +         +    +    DP   F SFFG  + F
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYG-----EEGLKTGGGSSGGSSGSFHYTFHGDPHATFASFFGGSNPF 108          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFR--SFFGQQDMF 373
            +DYY ILG+ +  SVE+I+K YRKL+L+ HPD+NK PG+E+ FK++ +A+  LSD + R  YD  G                     H   D++   ++IFR   F G  D+F
Sbjct:    5 RDYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQYDRFG---------------------HAGIDNQYSAEDIFRGADFGGFGDIF 96          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB3_MOUSE (DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 63/160 (39.38%), Postives = 73/160 (45.62%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFD---DELDPDEIFRSFFGQQDMF-----------------RTTRVYRTRGM--RSQEREEFHGAGLNF 451
            DYY +LGV R  S E IRKAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G V E                 HD F       DP E+FR FFG  D F                 R+TR  R+RG    S    EF G G  F
Sbjct:    3 DYYEVLGVPRQASAEAIRKAYRKLALKWHPDKNPEHKEEAERRFKQVAQAYEVLSDVRKREVYDRCGEVGEV------GGGGAAGSPFHDAFQYVFSFRDPAEVFREFFGGHDPFSFDFFGGDPLENFFGDRRSTRGSRSRGAVPFSTSFTEFPGFGGGF 156          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVD 72          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_METMA1.812e-1538.94Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_BACA21.812e-1555.07Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]
DNAJ_SYNJA3.091e-1554.55Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STAEQ3.091e-1542.45Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNJB5_MOUSE4.037e-1539.64DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN4.037e-1539.64DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN4.037e-1539.64DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ_METAC4.037e-1538.05Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNJB3_MOUSE5.273e-1539.38DnaJ homolog subfamily B member 3 OS=Mus musculus ... [more]
DNAJ_LISMF5.273e-1552.17Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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