CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LGV +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 256
            +DYY ILGV ++ + +EI+KAYRKLS + HPD NKAP + E FK++ +A++ LSDD+ R  YD  G  D  E
Sbjct:    4 RDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNE 75          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOAB (Chaperone protein dnaJ OS=Clostridium acetobutylicum GN=dnaJ PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 2
Query:   38 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDF---FDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQERE 424
            NKDYY +LG+E+  S +EI+KA+RKL++K HPDKN+    +EE FK++ +A++ LSD D + +YD  G  D                   DF   F D  D  +IF SFFG      ++R  +    R  + E
Sbjct:    3 NKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKKANYDRFGTAD-----------FNGGGGFGDFSGGFGDFGDLGDIFNSFFGGGFSGGSSRARKDAPQRGNDME 124          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LG+ +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYGHVD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LG+ +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LG+ +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LG+ +S S +EI+KAYRKLS + HPD NK  G++E FK++ +A++ LSD   R  YD  G VD
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVD 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIRA (Chaperone protein dnaJ OS=Deinococcus radiodurans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            DYY +LGV R+ S +EI+ AYRKL+LK+HPD+NK  G+ E F +V +A+  LSD + R HYD  G
Sbjct:    2 DYYELLGVSRTASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRAHYDRFG 66          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_LYSSC (Chaperone protein dnaJ OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.994e-15
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 247
            +DYY +LG+ +S + +EI+KAYRKLS + HPD NK PG++E FK++ +A++ LSDD  +  YD  G  D
Sbjct:    4 RDYYEVLGLTKSATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHED 72          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.994e-15
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 256
            +DYY +LGV ++ + +EI+KAYRKLS + HPD NKAP + E FK++ +A++ LSDD+ R  YD  G  D  E
Sbjct:    4 RDYYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNE 75          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_LISMC5.273e-1552.17Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_GEOKA5.273e-1551.39Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_CLOAB5.273e-1536.84Chaperone protein dnaJ OS=Clostridium acetobutylic... [more]
DNAJ_LISW66.887e-1550.72Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_LISMO6.887e-1550.72Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_LISMH6.887e-1550.72Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN6.887e-1550.72Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_DEIRA6.887e-1553.85Chaperone protein dnaJ OS=Deinococcus radiodurans ... [more]
DNAJ_LYSSC8.994e-1549.28Chaperone protein dnaJ OS=Lysinibacillus sphaericu... [more]
DNAJ_GEOTN8.994e-1550.00Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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