CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LG+ +  S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD+ R  YD  G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            KDYY +LGV RS S +EI+KAYRKL+L+ HPDKN     +EE FK+V +A++ LS+DD RR YD  G
Sbjct:    3 KDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB9_PONAB (DnaJ homolog subfamily B member 9 OS=Pongo abelii GN=DNAJB9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   29 IKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVY------RTRGMRSQEREEFH----GAGL 445
            I  +K YY ILGV +S S  +I+KA+ KL++K HPDKNK+P +E  F+++ +A++ LSD + R+ YD +G    F + +             +F  D+L  D     FFGQ    R+ + +      R  G  S++R  F     G GL
Sbjct:   21 ILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLG-HSAFTNGKGQRGSGSSFEQSFNFNFDDLFKD---FGFFGQNQNTRSKKHFENHFQTRPDGGSSRQRHHFQEFSFGGGL 165          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB9_MOUSE (DnaJ homolog subfamily B member 9 OS=Mus musculus GN=Dnajb9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 2
Query:   29 IKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFR 376
            I  +K YY ILGV +S S  +I+KA+ KL++K HPDKNK+P +E  F+++ +A++ LSD +SR+ YD +G    F + +             +F  D+L  D    +FFGQ    R
Sbjct:   21 ILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANSRKEYDTIG-HSAFTNGKGQRGNGSPFEQSFNFNFDDLFKD---FNFFGQNQNTR 132          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_STAAC1.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB1.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA91.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA81.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA31.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA21.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA11.534e-1451.52Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_CHLL21.534e-1458.21Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]
DNJB9_PONAB2.004e-1434.23DnaJ homolog subfamily B member 9 OS=Pongo abelii ... [more]
DNJB9_MOUSE2.004e-1437.93DnaJ homolog subfamily B member 9 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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