CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJC16_MOUSE (DnaJ homolog subfamily C member 16 OS=Mus musculus GN=Dnajc16 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDE 322
            D Y +LGV R+ S  +I+KAY+KL+ + HPDKNK PG+E+ F ++ KA++ LS+++ R +YDH G   E +  Q+            +F+ DE
Sbjct:   29 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGDAGENQGYQKQQREHRFRHFHENFYFDE 121          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB9_RAT (DnaJ homolog subfamily B member 9 OS=Rattus norvegicus GN=Dnajb9 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 2
Query:   29 IKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEH--NQRHNVXXXXXXAQHDFFDDELDPDEIFRSF--FGQQDMFRTTRVYRTRGMRSQE---REEFHGAGLNF 451
            I  +K+YY ILGV +S S  +I+KA+ KL++K HPDKNK+P +E  F+++ +A++ LSD + R+ YD +G    F +   QR N          +F       D++F+ F  FGQ    R+ + +       Q+   R+  H    +F
Sbjct:   21 ILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIG-HSAFTNGKGQRSNGSPFEQSFNFNF-------DDLFKDFNLFGQNQNTRSKKHFENHFQTRQDGSSRQRHHFQEFSF 160          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLTR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDDSRRHYD---HVGLVDEFEHNQRHNVXXXXXXAQHDFFDDE 322
            KDYY +LGV+R+ S +EI+KAY+KL+LK HPD+N  PG++EA   FK++  A++ LSD + R  YD   H G    F+ +Q            +DFF  E
Sbjct:    4 KDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRN--PGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEGASGGFDFSQGFGSAGDFSDIFNDFFGGE 101          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            KDYY ILGV RS   +EI+KAYRKL+LK HPDKN     +E+ FK+V +A++ LS+DD RR YD  G
Sbjct:    3 KDYYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAVT (Chaperone protein dnaJ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV R    EEI++AYR+L+ K HPD NK PG+EE FK++ +A++ LS+ ++R  YD  G
Sbjct:    3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFG 68          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_ANASP (Chaperone protein dnaJ OS=Anabaena sp. (strain PCC 7120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV R    EEI++AYR+L+ K HPD NK PG+EE FK++ +A++ LS+ ++R  YD  G
Sbjct:    3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFG 68          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJC16_RAT (DnaJ homolog subfamily C member 16 OS=Rattus norvegicus GN=Dnajc16 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDD 319
            D Y +LGV R+ S  +I+KAY+KL+ + HPDKNK PG+E+ F ++ KA++ LS+++ R +YDH G   E +  Q+          ++ +FD+
Sbjct:   29 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRTNYDHYGDAGENQGYQQQREYRFRHFHENFYFDE 120          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14
Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELD-------PDEIFRSFFGQQDMF 373
            DYY +LGV+R  S E+I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G         +  +        H  FD   +       PD++FR FFG +D F
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG---------KEGLNGGGGGGSH--FDSPFEFGFTFRNPDDVFREFFGGRDPF 110          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14
Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELD-------PDEIFRSFFGQQDMF 373
            DYY +LGV+R  S E+I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G         +  +        H  FD   +       PD++FR FFG +D F
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG---------KEGLNGGGGGGSH--FDSPFEFGFTFRNPDDVFREFFGGRDPF 110          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14
Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELD-------PDEIFRSFFGQQDMF 373
            DYY +LGV+R  S E+I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G         +  +        H  FD   +       PD++FR FFG +D F
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG---------KEGLNGGGGGGSH--FDSPFEFGFTFRNPDDVFREFFGGRDPF 110          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DJC16_MOUSE3.418e-1439.78DnaJ homolog subfamily C member 16 OS=Mus musculus... [more]
DNJB9_RAT4.464e-1433.11DnaJ homolog subfamily B member 9 OS=Rattus norveg... [more]
DNAJ_WOLTR4.464e-1443.00Chaperone protein dnaJ OS=Wolbachia sp. subsp. Bru... [more]
DNAJ_PROVI4.464e-1458.21Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]
DNAJ_ANAVT4.464e-1451.52Chaperone protein dnaJ OS=Anabaena variabilis (str... [more]
DNAJ_ANASP4.464e-1451.52Chaperone protein dnaJ OS=Anabaena sp. (strain PCC... [more]
DJC16_RAT4.464e-1439.13DnaJ homolog subfamily C member 16 OS=Rattus norve... [more]
DNJB6_PONAB5.830e-1439.50DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA5.830e-1439.50DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN5.830e-1439.50DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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