CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELD-------PDEIFRSFFGQQDMF 373
            DYY +LGV+R  S E+I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G         +  +        H  FD   +       P+++FR FFG +D F
Sbjct:    3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYG---------KEGLNGGGGGGSH--FDSPFEFGFTFRNPEDVFREFFGGRDPF 110          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRT 379
            KDYY  LG+ R  S EEI++AYR+ +L+ HPDKNK PG+EE FK++ +A+  LSD   R  +D  G  +  + +                +    DP  +F  FFG ++ F T
Sbjct:    3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG-EEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDT 114          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STRR6 (Chaperone protein dnaJ OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 2
Query:   38 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            N ++Y  LGV ++ S +EI+KAYRKLS K HPD NK PG+E+ +K+V +A++ LSDD  R  YD  G
Sbjct:    3 NTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_STRPN (Chaperone protein dnaJ OS=Streptococcus pneumoniae GN=dnaJ PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 2
Query:   38 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            N ++Y  LGV ++ S +EI+KAYRKLS K HPD NK PG+E+ +K+V +A++ LSDD  R  YD  G
Sbjct:    3 NTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY +LGV RS   +EI+KAYRKL+LK HPDKN     +E+ FK+V +A++ LS+DD RR YD  G
Sbjct:    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 238
            +DYY ILGV RS   +EI+KAYRKL+LK HPDKN     +EE FK+  +A++ LS+DD RR YD  G
Sbjct:    3 RDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFG 69          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: TID_DROVI (Protein tumorous imaginal discs, mitochondrial OS=Drosophila virilis GN=l(2)tid PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQ--------RHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQ 361
            KDYYA LGV ++ + ++I+KAY +L+ K HPD NK  P + + F+ V +A++ LSDD  RR YD  G   E  + Q                  +Q+  F   +DP+E+FR  FG+
Sbjct:   79 KDYYATLGVAKNANAKDIKKAYYELAKKYHPDTNKDDPDASKKFQDVSEAYEVLSDDQKRREYDTYGQTTENMNRQGAGGAGGFGGGPFGPDGFSQNWQFRSTIDPEELFRKIFGE 194          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMF 373
            +YY +LGV+R+ S E+I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G     +               ++F      PD++FR FFG +D F
Sbjct:    3 EYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYG-----KEGLTGGGGGSHFDNPYEFGFTFRSPDDVFRDFFGGRDPF 109          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 2
Query:   44 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMF 373
            +YY +LGV+R+ S ++I+KAYR+L+LK HPDKN      +E  FK+V +A++ LSD   R  YD  G     E             A   F      PD++FR FFG +D F
Sbjct:    3 EYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGK----EGLTNRGGGSHFDEAPFQFGFTFRSPDDVFRDFFGGRDPF 110          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 2
Query:   41 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYD---HVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            +DYY IL V RS + ++I+KA+RKL++K HPD+NK   +EE FK+V +A++ LSD++ R+ YD   H GL     H    N       +    FD E    ++F  FFG
Sbjct:    5 RDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQGGFN-PYDVFNSVFSGFDFEGGFGDVFSQFFG 112          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNJB6_BOVIN7.614e-1438.66DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJB1_HUMAN7.614e-1437.17DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNAJ_STRR67.614e-1452.24Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_STRPN7.614e-1452.24Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_PELLD7.614e-1455.22Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_CHLP87.614e-1456.72Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
TID_DROVI9.944e-1437.07Protein tumorous imaginal discs, mitochondrial OS=... [more]
DNJB6_XENTR9.944e-1439.29DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNJ6A_XENLA9.944e-1439.29DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]
DNAJ_MYCGA9.944e-1440.37Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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