CX292102

Overview
NameCX292102
Unique NameCX292102
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292102 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.142e-29
Identity = 59/118 (50.00%), Postives = 79/118 (66.95%), Query Frame = -2
Query:  235 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWK 588
            L   M+RVGDLD+S+ FY    GM LLRK+D P  ++T+A +GYG E +N V+ELT+N+G   YD GN +  IA+G +D+Y T + I+  GGKV REPGP+    T I    DPDG+K
Sbjct:    3 LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYK 120          
BLAST of CX292102 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -2
Query:  223 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV 588
            L   MLRVG+L++S++FY+   GM+LLR++D PE ++T+A +GYG E  + VLELT+N+    YD GNAY  IA+  DD Y+  E +K  GG V RE GP+    T I    DPDG+K  F+
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFI 124          
BLAST of CX292102 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -2
Query:  223 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV 588
            L   MLRVG+L++S++FY+   GM+LLR++D PE ++T+A +GYG E  + VLELT+N+    YD GNAY  IA+  DD Y+  E +K  GG V RE GP+    T I    DPDG+K  F+
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFI 124          
BLAST of CX292102 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 49/147 (33.33%), Postives = 68/147 (46.26%), Query Frame = -2
Query:  226 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGY-----GPED----------KNVVLELTYNYGV------TDYDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG-WKTVF 588
            L Q M R+ D   S+ FY +  GM LL++ D PE K+++  MGY      P D          +   LELT+N+G       T Y  GN+    +  I +  DDVYK  E  +  G +  ++  PL G    I    DPDG W  +F
Sbjct:   28 LQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKK--PLDGKMKGIAFIKDPDGYWIEIF 172          
The following BLAST results are available for this feature:
BLAST of CX292102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
LGUL_SYNY34.142e-2950.00Probable lactoylglutathione lyase OS=Synechocystis... [more]
LGUL_NEIMB7.812e-2847.54Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA7.812e-2847.54Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_SOLLC2.982e-1133.33Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionC04010E06SK FlavFr1 Citrus clementina cDNA clone C04010E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292102 ID=CX292102; Name=CX292102; organism=Citrus clementina; type=EST; length=619bp
AAACTTCCTTCTCACTGCACCCAAAGCCAACAGCAAGTACATTTTATTGC
GATTATCAGGGAGAACTATACTATAGCAATATTAACAAAATGGGATTCGA
TACACACTCAGTTGGAACTTCTTCCAGGAATCTTCTTAGCCCAGATTCAG
AATTCAGTGGTATAAGCTGGGTAAGATGATGCTCAATACTCATTCCAACT
CCTTGAGAAAATCAACATTATCAACAAAAACCGTTTTCCAACCGTCAGGA
TCCAAGCATGCAGTAATCTTGGTGTTGATACCAGGTAATGGGCCAGGTTC
CCGTGTAACTTTCCCACCAAAAAGTTTAATTGCCTCTGCAGTTTTATAAA
CATCATCTGTGCCTATTGCAATCTGAGCATAAGCATTTCCTTTATCATAA
TCAGTGACTCCATAGTTGTAAGTCAACTCAAGCACAACATTTTTGTCTTC
GGGACCATATCCCATCATGGCTATTGTATACTTGTATTCTGGATTATCTC
TTTTGCGAAGAAGCTCCATGCCAAAGGCCTGCTCATAAAAATTTATGGAG
CGATCAAGATCGCCAACACGAAGCATTACTTGACACAAGGGCTCAGGGGT
AGGCCCTCTTTCCAACAGT
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