CX292103

Overview
NameCX292103
Unique NameCX292103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: EFHA1_HUMAN (EF-hand domain-containing family member A1 OS=Homo sapiens GN=EFHA1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 58/206 (28.16%), Postives = 99/206 (48.06%), Query Frame = 1 
Query:    4 FSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLN---VKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            F VAFKM D D N  I K EF ++  ++   +       +   TG     VK P  N  L   FFG+ G+ +L +++F +FM NL  E+  +EF  +  K    +  EDFA  ++   +  + +     V     E+      I+ +EFK+F      L+ F +A+  +   +  +   +F+RA     G  L++N++D +F++FD
Sbjct:  177 FHVAFKMLDTDGNEMIEKREFFKLQKIISKQDDLMTVKTN--ETGYQEAIVKEPEINTTLQMRFFGKRGQRKLHYKEFRRFMENLQTEIQEMEFLQFS-KGLSFMRKEDFAEWLLFFTNTENKDIYWKNV----REKLSAGESISLDEFKSFCHFTTHLEDFAIAMQMFSLAHRPVRLAEFKRAVKVATGQELSNNILDTVFKIFD 375
The following BLAST results are available for this feature:
BLAST of CX292103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
EFHA1_HUMAN2.230e-1428.16EF-hand domain-containing family member A1 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionC04010E07SK FlavFr1 Citrus clementina cDNA clone C04010E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292103 ID=CX292103; Name=CX292103; organism=Citrus clementina; type=EST; length=622bp
AGCTTTTCTGTGGCCTTCAAGATGTTTGACATTGACAACAATGGGGAGAT
CAGTAAGGAAGAATTTAAGCAAGTCATGGCTTTGATGAGATCTCATAACA
GACAAGGGGCTTTCCATAGGGATGGACTTCGGACTGGGCTAAATGTTAAG
GGTCCTGTGGAAAATGGAGGTCTGGTGGAATACTTCTTTGGTGAAGATGG
AAGAGCACGGCTCCAACATGAGAAATTTGTCCAATTTATGAGAAATTTGT
ATGAGGAAATGCTGAGACTGGAGTTTGCACATTATGACTACAAGCAACGG
GGAACCATATCAGCCGAGGACTTTGCGCTGTCCATGGTTGCTTCTGCTGA
TATGGGACACTTAAACAAATTGCTTAATCGGGTTGATCAATTAAAGAATG
AGCGGCATCTTTGTGATTTACGCATTACATTTGAAGAATTTAAAAATTTT
GCCGAGCTGCGGAGAAAATTGCAGCCATTTTGTTTGGCCCTTTTTAGTTA
TGGAAAAGTAAATGGTTTGTTGACACGGGATGACTTCCAACGAGCTGCAT
ACCGTGTCTGCGGCATATTACTCACTGACAACGTGATTGACATCATTTTC
CAAGTGTTTGACTCAAATCGTG
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