CX292105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.401e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 538 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.748e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.748e-22 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 ++KPL DRVLVK EEKT GG+F+P TA+ KP GEVVA G GK KL ++VK G V++SKYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.280e-21 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 ++KPL DRVLVK EEKT GG+++P TA+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++ +G +HL++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 260 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 260 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 538 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 538 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 538 +KPLGDRV++++ EEKT GGI LP TA+ KPQ G+VVAVG G+ + K +D+ VK VIYSKYAGTE++ +G +LI+RE D++ I+ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAIV 93
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.415e-20 Identity = 47/94 (50.00%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKT--KLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 +KPL DRVLVK EEKT GG+++P TA+ KP G+VVAVG GK VG + ++VK G +V+++KYAGTE++ +G +HL++RE+D++ I++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGK-VGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95 The following BLAST results are available for this feature:
BLAST of CX292105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 497
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292105 ID=CX292105; Name=CX292105; organism=Citrus clementina; type=EST; length=587bpback to top |