CX292105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_PSEPF (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 541 ++PL DRV+++ E+KT GGI LP +A K GE++AVG GK + ++ +SVK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVIE 96
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_MACCJ (10 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11 Identity = 32/93 (34.41%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 +KP G+RV+++ E T GI L +A+ K G VVAVG G+ + +++I V G +V+Y + GTE++ ++++L+E+D++ I+E Sbjct: 2 LKPYGNRVVIQKTERETTTASGIVLTDSAKEKTNEGTVVAVGTGRILNNGERVEIGVSVGDRVVYEPFGGTEVKTGDESYIVLKEEDIIAIVE 94
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_CHRSD (10 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 266 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGILE 541 I+PL DRV+V+ E+KT GGI LP AQ KP GEV+AVG G+ + ++ + VK G VI+ G E + +G LI+ E D++ + E Sbjct: 3 IRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVKVGDTVIFKDGFGVEKQKIDGEEVLIMSESDILAVAE 96
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_CAMJR (10 kDa chaperonin OS=Campylobacter jejuni (strain RM1221) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 + +PLG RVLVK + T GI +P A+ KP GEVVAV + T + G +++++KY GTE++ + +L+L DD++GIL+ Sbjct: 2 NFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVSKEIT--------DIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK 86
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_CAMJJ (10 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 + +PLG RVLVK + T GI +P A+ KP GEVVAV + T + G +++++KY GTE++ + +L+L DD++GIL+ Sbjct: 2 NFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVSKEIT--------DIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK 86
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_CAMJE (10 kDa chaperonin OS=Campylobacter jejuni GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 + +PLG RVLVK + T GI +P A+ KP GEVVAV + T + G +++++KY GTE++ + +L+L DD++GIL+ Sbjct: 2 NFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVSKEIT--------DIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK 86
BLAST of CX292105 vs. ExPASy Swiss-Prot
Match: CH10_CAMJ8 (10 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 263 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 541 + +PLG RVLVK + T GI +P A+ KP GEVVAV + T + G +++++KY GTE++ + +L+L DD++GIL+ Sbjct: 2 NFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVSKEIT--------DIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK 86 The following BLAST results are available for this feature:
BLAST of CX292105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 497
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292105 ID=CX292105; Name=CX292105; organism=Citrus clementina; type=EST; length=587bpback to top |