CX292135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4978_ORYSJ (UPF0497 membrane protein Os07g0442900 OS=Oryza sativa subsp. japonica GN=Os07g0442900 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.673e-27 Identity = 64/145 (44.14%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 72 GIDVGLRVLLFAATLVSVIVMATAKQTELVT----PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSAT 494 G ++ LR LLFA +L +++V+ TAKQT +V PP I V AK+T SPA IY +AAL C YS+IT ++S+ ++S A + + L Y DV ++GLKGN H+RW KICNVY K+CRHIGS+T Sbjct: 38 GANLALRALLFAVSLSALVVLVTAKQTVMVPFVIRPPQF-ILAPVPAKYTHSPALIYLLAALCATCFYSLITAISSVRLLSSSACSAKTLFYLILLDVFYAAVMASATGTAGAVAWVGLKGNSHTRWNKICNVYGKFCRHIGSST 181
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4974_MAIZE (UPF0497 membrane protein 4 OS=Zea mays PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.156e-26 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 24 APAKYEDQRAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIP-IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 AP+ A + G D+ LRVLLFA TL ++V+ATA+QT V P IP + +S+ AKF DSPA IY + AL V C YS+++ + + +S R L +DV +IGLKGN H+ W KICN+Y K+CRHIGS+ Sbjct: 19 APSPPAAAAAACRSLSGADLALRVLLFAVTLSGLVVLATAEQTVRVPVPQIPGLVLSLPAKFKDSPALIYLLVALCVTCFYSLLSTAFTSLKLLFGSSPSRTLFLLVLFDVFYAAIMASATGSAGGVAWIGLKGNSHTNWNKICNIYGKFCRHIGSS 175
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4971_PICSI (UPF0497 membrane protein 1 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.677e-19 Identity = 47/139 (33.81%), Postives = 79/139 (56.83%), Query Frame = 3 Query: 63 NYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRH 479 ++F +D LR+L+ +T + IVM T KQT + +PI + AK+ SPAF++FV A +VAC Y++++++ S+ K S + + D+VM+ Y+G KGN H++W K+C +YD++C H Sbjct: 36 SFFVVDFSLRLLVIGSTFTAAIVMGTNKQTAI-----LPIVGPLSAKYQYSPAFVFFVIANAVACGYTLLSLI--FSITGKFTSTPLSVFLLSVTDLVMVALVSAGVSAAAAIAYVGYKGNSHTQWGKVCGIYDRFCHH 167
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497B_SOYBN (UPF0497 membrane protein 11 OS=Glycine max PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16 Identity = 50/145 (34.48%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 78 DVGLRVLLFAATLVSVIVMATAKQTELV----TPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSATGV 500 D+ LR+L F TLV+ IV+A KQT+LV + P+ V + AK+ AF+YF+ ++AC Y+ +++L L++V++ S K L A D M+ +G KGN H W K+CNV+ K+C + ++ GV Sbjct: 24 DLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVTNAIACTYAAMSLL--LALVNRGKS-KGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGV 165
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497A_SOYBN (UPF0497 membrane protein 10 OS=Glycine max PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.506e-15 Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 78 DVGLRVLLFAATLVSVIVMATAKQTELV----TPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSATGV 500 D+ LR+L F TLV+ IV+A KQT++V + P+ V + AK+ A +YF+ ++AC Y+++++L L++V++ S K L A D M+ +G KGN H W K+CNV+ K+C + ++ GV Sbjct: 23 DLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLL--LALVNRGKS-KGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGV 164
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4974_VITVI (UPF0497 membrane protein 4 OS=Vitis vinifera GN=GSVIVT00019813001 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 78 DVGLRVLLFAATLVSVIVMATAKQTELVT----PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSATGV 500 D+ LRV+ A TLV+ +++ KQT++V+ P P+ V V AK+ AF+YFV + ++AC Y+ +++L S V K L L D+VM+ +G +GN RW K+CNV+ K+C + A G+ Sbjct: 31 DLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIACSYAALSLLLS---VGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGL 172
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497R_ARATH (UPF0497 membrane protein At4g15630 OS=Arabidopsis thaliana GN=At4g15630 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 43/147 (29.25%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 72 GIDVGLRVLLFAATLVSVIVMATAKQTELVT----PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSATGV 500 G+++ +RVL T+V+ V+ AKQT++V P P+ VS AK + AF+Y ++A ++AC Y+ I+++ + ++SK +K LL+ D++M+ +G GN H W K+C V+ K+C + + Sbjct: 26 GLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIV--IVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAI 170
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4975_MAIZE (UPF0497 membrane protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 47/144 (32.64%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 72 GIDVGLRVLLFAATLVSVIVMATAKQTEL----VTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 G V LRV + AATLVS +VM +QT VT P+ V + A ++ S AF+YFV A ++ CL+S + A S + ++ D++ L +G +GN H RW K+CNVY ++C +A Sbjct: 56 GCSVALRVFVLAATLVSAVVMGVDRQTSTIRITVTDALPPLEVPLTANWSYSSAFVYFVVANAMVCLFSAAALAACRS--------RAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHVRWPKVCNVYGRFCERAMAA 191
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4973_SORBI (UPF0497 membrane protein Sb03g014480 OS=Sorghum bicolor GN=Sb03g014480 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 46/146 (31.51%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 48 RAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELV----TPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYC 473 RA + G V LRV + A+TLVS +VM +QT + T P+ V + A ++ S AF+YFV A ++ CL+S + A S + ++ D++ L +G +GN H RW K+CNVY ++C Sbjct: 50 RAAQAPVDGCSVALRVFVVASTLVSAVVMGVDRQTRTIQITITDALPPLEVPLTANWSYSSAFVYFVVANAMVCLFSAAALAACRS--------RAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHVRWAKVCNVYGRFC 187
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497Q_ARATH (UPF0497 membrane protein At4g15620 OS=Arabidopsis thaliana GN=At4g15620 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 40/138 (28.99%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 72 GIDVGLRVLLFAATLVSVIVMATAKQTELVT----PPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYC 473 G+++ +RVL T+ + V+ AKQT++V+ P P+ ++ AK + AF+Y ++ ++AC Y+ I++ ++ ++S+ +K+LL+ D+VM+ +GL GN H W K+C V+ K+C Sbjct: 26 GVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISI--AILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFC 161 The following BLAST results are available for this feature:
BLAST of CX292135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292135 ID=CX292135; Name=CX292135; organism=Citrus clementina; type=EST; length=605bpback to top |