CX292135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497E_SORBI (UPF0497 membrane protein Sb06g018970 OS=Sorghum bicolor GN=Sb06g018970 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.064e-13 Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 78 DVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKP-ASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI-GSATG 497 DV LR L AT+ S I M T +T P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A RL+L F+D VML Y+ KGN + W IC +D +C I GS G Sbjct: 34 DVFLRFLSIVATIASAISMGTTNETL----PFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHIIRPRARYSRLIL--VFFDAVMLALLTAGASAAAAIVYLAHKGNVRANWFAICQQFDSFCERISGSLIG 169
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4975_VITVI (UPF0497 membrane protein 5 OS=Vitis vinifera GN=GSVIVT00035198001 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.064e-13 Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 87 LRVLLFAATLVSVIVMATAKQTELVTPPGI---PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRL-LLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 LRV+ F AT + IVM ++T+ + I PIR ++KAKF +PAF++FV A +A +Y+++ + + V + K L L+ + D+V++ +G GN H++W KIC+ ++ +C G A Sbjct: 33 LRVVAFLATASATIVMGLNQETKTLLVGTIGTTPIRATLKAKFQHTPAFVFFVVANGLASVYNLV--MLGVDVFGRKLDCKGLRLVIISILDMVIVAVVAAGASSAAFMAELGKNGNSHAKWNKICDKFESFCHQGGGA 169
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4971_ORYSJ (UPF0497 membrane protein Os04g0460400 OS=Oryza sativa subsp. japonica GN=Os04g0460400 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.164e-12 Identity = 47/163 (28.83%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 12 MASEAPAKYEDQRAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI-GSATG 497 ++S+AP V +D LR + T+ S I M T +T P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A+ L+ F+D ML Y+ KGN + W IC +D +C I GS G Sbjct: 6 ISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNETL----PFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRP-RARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIG 163
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4971_ORYSI (UPF0497 membrane protein 1 OS=Oryza sativa subsp. indica GN=H0219H12.8 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.164e-12 Identity = 47/163 (28.83%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 12 MASEAPAKYEDQRAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI-GSATG 497 ++S+AP V +D LR + T+ S I M T +T P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A+ L+ F+D ML Y+ KGN + W IC +D +C I GS G Sbjct: 6 ISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNETL----PFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRP-RARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIG 163
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497T_ARATH (UPF0497 membrane protein At4g20390 OS=Arabidopsis thaliana GN=At4g20390 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.520e-12 Identity = 41/137 (29.93%), Postives = 73/137 (53.28%), Query Frame = 3 Query: 81 VGLRVLLFAATLVSVIVMATAKQTE---LVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRL-LLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRH 479 +GLR+ F ATL + IVM+ K+T+ + T +PI+ ++ AKF +PAF++FV A + ++++ ++ + + S+ K L LL A D++ +G GN H++W K+C+ + YC H Sbjct: 20 LGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIV--VQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDH 154
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497C_RICCO (UPF0497 membrane protein 12 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.593e-12 Identity = 46/153 (30.07%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 45 QRAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELV----TPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 +R R N F + LRVL F T + IV QTE V T P+ V V AK+ AF++FV + ++AC Y+ I+++ S K ++ D++M+ +G KGN H +W K+CNV+ K+C + ++ Sbjct: 22 ERGGRTNSFLV---LRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIACSYAAISVMLSF------CGKKSMVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNKVCNVFGKFCNQVAAS 165
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4978_VITVI (UPF0497 membrane protein 8 OS=Vitis vinifera GN=GSVIVT00018013001 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.593e-12 Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 66 YFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI 482 + G + LR+L ATL + +M T+KQT V + V+AK++ S AF +F A ++AC S++T+ + S+ + ++ + F D+ M+ Y+G GN+H+ W IC+ +D+YC I Sbjct: 20 FLGAHICLRILTVTATLTAAWMMITSKQTVEV------YGIQVEAKYSYSSAFKFFSYANAIACGCSVLTLFPAFSLFYRGSTPMKFFFLFLH-DLCMMSLVLAGCAAATAIGYVGRYGNNHAGWMAICDQFDEYCNRI 151
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4976_VITVI (UPF0497 membrane protein 6 OS=Vitis vinifera GN=GSVIVT00023588001 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12 Identity = 39/136 (28.68%), Postives = 70/136 (51.47%), Query Frame = 3 Query: 87 LRVLLFAATLVSVIVMATAKQTELVTPPGIP----IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI 482 LR+L TL++ +V KQT+++ I + V V AK++D AF+Y V + ++AC Y+ I+++ ++++ + R+L D+ M+ +G GN H W K+CNV+D +C H+ Sbjct: 37 LRILGLLLTLIAAVVAGVDKQTKIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIACSYAAISLVL-VTMLGRRGKGGRVLAVIVL-DLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHHL 170
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U49B7_ARATH (UPF0497 membrane protein At5g44550 OS=Arabidopsis thaliana GN=At5g44550 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 3 Query: 81 VGLRVLLFAATLVSVIVMATAKQTE--LVTPPG-IPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRH 479 +GLR+L F+ATL + IVM K+T+ +V G PI+ + AKF +PAF++FV A ++ ++++ M+A K LL A D++ + +G GN H+RW KIC+ + YC H Sbjct: 20 LGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVSFHNLL-MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCDH 154
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4974_ORYSJ (UPF0497 membrane protein Os06g0231050 OS=Oryza sativa subsp. japonica GN=Os06g0231050 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 52/166 (31.33%), Postives = 74/166 (44.58%), Query Frame = 3 Query: 6 HTMASEAPAKYEDQRAVRENYFGIDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITM-LASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI-GSATG 497 H S+AP R V + +DV LR + TL S I M T QT P + KA+++D P +FV A S+ Y I+++ L+ + V+ A RL+L F +D ML Y+ KGN + W IC +D +C I GS G Sbjct: 7 HGETSKAPLS----RGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTL----PFFTQFIRFKAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIF--FDAAMLALVTAGASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIG 162 The following BLAST results are available for this feature:
BLAST of CX292135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292135 ID=CX292135; Name=CX292135; organism=Citrus clementina; type=EST; length=605bpback to top |