CX292135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497E_SOYBN (UPF0497 membrane protein 14 OS=Glycine max PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11 Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 81 VGLRVLLFAATLVSVIVMATAKQTELVTPPGI---PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLL-YFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 + LRV+ F AT + +VMA KQT+ + I P+ +++ A F +PAFI+FV ++A Y+++ + + ++ K L L A DV+ + +G GN H+RW KIC+ ++ YC G A Sbjct: 28 LSLRVVAFFATASATLVMAFNKQTKGMVVATIGTNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVI--GVEILGPQYDYKGLRLGLIAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYCNRGGVA 166
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497L_SORBI (UPF0497 membrane protein Sb10g008220 OS=Sorghum bicolor GN=Sb10g008220 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.195e-11 Identity = 45/143 (31.47%), Postives = 66/143 (46.15%), Query Frame = 3 Query: 75 IDVGLRVLLFAATLVSVIVMATAKQTELVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITM-LASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHI-GSATG 497 +D+ LR + TL S I M T +T P + KA+++D P +FV A S+ C Y I+++ L+ + ++ A RLLL F D ML Y+ KGN + W IC +D +C I GS G Sbjct: 28 LDLILRFIAIIGTLASAIAMGTTNETL----PFFTQFIRFKAQYSDLPTLTFFVVANSIVCAYLILSLPLSIVHIIRSRAKYSRLLLIFL--DAAMLALVTAGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGSLIG 164
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U497F_RICCO (UPF0497 membrane protein 15 OS=Ricinus communis GN=RCOM_0770240 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 41/138 (29.71%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 87 LRVLLFAATLVSVIVMATAKQTE---LVTPPGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 LR + F AT + IVMA ++T+ + T PI+ +V AKF +PAF++FV A + +++++ M+A + V K + A D++ +G GN H++W KIC+ + +C H G+A Sbjct: 30 LRFVAFLATAAATIVMAANRETKTFVVATIGSTPIKATVTAKFQHTPAFVFFVIANGMGSIHNLV-MIAGDTFVRKFDYKGLRWVTVAILDMLTAALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAA 166
BLAST of CX292135 vs. ExPASy Swiss-Prot
Match: U4977_ORYSJ (UPF0497 membrane protein Os12g0610800 OS=Oryza sativa subsp. japonica GN=Os12g0610800 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 43/149 (28.86%), Postives = 73/149 (48.99%), Query Frame = 3 Query: 54 VRENYFGIDVGLRVLLFAATLVSVIVMATAKQ--TELVTPPGI-PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNDHSRWTKICNVYDKYCRHIGSA 491 V++ + +R +F AT V+ ++M KQ T +V G P+ + AKF D+PAF++FV A ++A Y+++ ++ + + S LL D+V+L +G GN H+RW IC+ + +C H G A Sbjct: 21 VKDKLITLQPVVRACVFLATAVAAVIMGLNKQSYTTVVAIVGTRPVTQTFTAKFKDTPAFVFFVIANAIASGYNLMVLVTRRILQRRAQSLSVHLL-----DMVILTLLATGSATAASMAQLGKNGNLHARWNPICDKFGSFCNHGGIA 164 The following BLAST results are available for this feature:
BLAST of CX292135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292135 ID=CX292135; Name=CX292135; organism=Citrus clementina; type=EST; length=605bpback to top |